Evidence map›Paper›PMID 24435798›Full record

ArticleNucleic acids research2014

Dicer-related helicase 3 forms an obligate dimer for recognizing 22G-RNA.

Megan E Fitzgerald, Adriana Vela, Anna Marie Pyle

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Megan E FitzgeraldDepartment of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06520, USA, Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA and Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520, USA.
Adriana Vela
Anna Marie Pyle
Howard Hughes Medical Institute · USYale University · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Dicer is a specialized nuclease that produces RNA molecules of specific lengths for use in gene silencing pathways. Dicer relies on the correct measurement of RNA target duplexes to generate products of specific lengths. It is thought that Dicer uses its multidomain architecture to calibrate RNA product length. However, this measurement model is derived from structural information from a protozoan Dicer, and does not account for the helicase domain present in higher organisms. The Caenorhabditis elegans Dicer-related helicase 3 (DRH-3) is an ortholog of the Dicer and RIG-I family of double-strand RNA activated ATPases essential for secondary siRNA production. We find that DRH-3 specifies 22 bp RNAs by dimerization of the helicase domain, a process mediated by ATPase activity and the N-terminal domain. This mechanism for RNA length discrimination by a Dicer family protein suggests an alternative model for RNA length measurement by Dicer, with implications for recognition of siRNA and miRNA targets.

Indexed as

Adenosine TriphosphatasesAdenosine TriphosphateCaenorhabditis elegans ProteinsDEAD-box RNA HelicasesProtein BindingProtein MultimerizationProtein Structure, TertiaryRNA, Double-StrandedRNA HelicasesRNA, Small InterferingAdenosine TriphosphatasesAdenosine TriphosphateCaenorhabditis elegans ProteinsDEAD-box RNA HelicasesDrh-3 protein, C elegansRNA, Double-StrandedRNA HelicasesRNA, Small Interfering

Identifiers

PMID24435798
PMCPMC3973318
OpenAlexW2122189923

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.