Evidence map›Paper›PMID 24434851›Full record

ArticleEpigenetics2014

MBD4 cooperates with DNMT1 to mediate methyl-DNA repression and protects mammalian cells from oxidative stress.

Sophie Laget, Benoit Miotto, Hang Gyeong Chin, Pierre-Olivier Estève, Richard J Roberts, Sriharsa Pradhan, Pierre-Antoine Defossez

Open access · hybridAbstract read
In one paragraph

Article in Epigenetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 52 citations in OpenAlex.

  1. Meta-analysis of the association betweenThe Journal of international medical research · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Sophie LagetUniversité Paris Diderot; Sorbonne Paris Cité; Epigenetics and Cell Fate; UMR 7216 CNRS; Paris, France; New England Biolabs; Ipswich, MA USA.
Benoit MiottoUniversité Paris Diderot; Sorbonne Paris Cité; Epigenetics and Cell Fate; UMR 7216 CNRS; Paris, France.
Hang Gyeong ChinNew England Biolabs; Ipswich, MA USA.
Pierre-Olivier EstèveNew England Biolabs; Ipswich, MA USA.
Richard J RobertsNew England Biolabs; Ipswich, MA USA.
Sriharsa PradhanNew England Biolabs; Ipswich, MA USA.
Pierre-Antoine DefossezUniversité Paris Diderot; Sorbonne Paris Cité; Epigenetics and Cell Fate; UMR 7216 CNRS; Paris, France.
New England Biolabs (China) · CNCentre National de la Recherche Scientifique · FRDélégation Paris 7 · FREpigénétique et Destin Cellulaire · FRNew England Biolabs (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oxidative stress induces genome-wide remodeling of the chromatin structure. In this study, we identify Methyl-CpG Binding Protein 4 (MBD4), a multifunctional enzyme involved in DNA demethylation, base excision repair, and gene expression regulation, as an essential factor in response to oxidative stress. We provide evidence that MBD4 is upregulated at the protein level upon oxidative stress, and that MBD4 is essential for cell survival following oxidative stress. In these cells, MBD4 and DNMT1 are recruited at sites of oxidation-induced DNA damage, where we speculate they participate in DNA repair. MBD4 and DNMT1 also share genomic targets in unstressed cells. Using genome-wide analysis of MBD4 binding sites, we identified new targets potentially co-regulated by MBD4 and DNA methylation. We identified two new binding sites for MBD4 and DNMT1 at methylated CpG islands of CDKN1A/p21 and MSH4, where they synergistically mediate transcriptional repression. Our study provides evidence that the interaction between DNMT1 and MBD4 is involved in controlling gene expression and responding to oxidative stress.

Indexed as

DNA MethylationOxidative StressAnimalsCell Cycle ProteinsCell LineCell SurvivalChlorocebus aethiopsChromatinCpG IslandsCyclin-Dependent Kinase Inhibitor p21DNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA DamageEndodeoxyribonucleasesGene Expression RegulationHumansCDKN1A protein, humanCell Cycle ProteinsChromatinCyclin-Dependent Kinase Inhibitor p21DNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNMT1 protein, humanEndodeoxyribonucleasesMBD4 protein, humanMSH4 protein, humanDNA methylationDNMT1MBD4oxidative stresstranscription

Identifiers

PMID24434851
PMCPMC4121365
OpenAlexW2004107728

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.