Evidence map›Paper›PMID 24432138›Full record

ArticleSystems and synthetic biology2013

Reconstruction and visualization of carbohydrate, N-glycosylation pathways in Pichia pastoris CBS7435 using computational and system biology approaches.

Akriti Srivastava, Pallavi Somvanshi, Bhartendu Nath Mishra

Abstract read
In one paragraph

Article in Systems and synthetic biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Akriti SrivastavaDepartment of Biotechnology, Institute of Engineering and Technology, G.B. Technical University, Sitapur Road, Lucknow, 226021 India.
Pallavi SomvanshiDepartment of Biotechnology, TERI University, 10 Institutional Area, Vasant Kunj, New Delhi, 110070 India.
Bhartendu Nath MishraDepartment of Biotechnology, Institute of Engineering and Technology, G.B. Technical University, Sitapur Road, Lucknow, 226021 India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pichia pastoris is an efficient expression system for production of recombinant proteins. To understand its physiology for building novel applications it is important to understand and reconstruct its metabolic network. The metabolic reconstruction approach connects genotype with phenotype. Here, we have attempted to reconstruct carbohydrate metabolism pathways responsible for high biomass density and N-glycosylation pathways involved in the post translational modification of proteins of P. pastoris CBS7435. Both these metabolic pathways play a crucial role in heterologous protein production. We report novel, missing and unannotated enzymes involved in the target metabolic pathways. A strong possibility of cellulose and xylose metabolic processes in P. pastoris CBS7435 suggests its use in the area of biofuels. The reconstructed metabolic networks can be used for increased yields and improved product quality, for designing appropriate growth medium, for production of recombinant therapeutics and for making biofuels.

Indexed as

CarbohydratePichiaReconstructionSystem biology

Identifiers

PMID24432138
PMCPMC3641283

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.