Evidence map›Paper›PMID 24430866›Full record

ArticlePlant cell reports2014

Wound-induced expression of DEFECTIVE IN ANTHER DEHISCENCE1 and DAD1-like lipase genes is mediated by both CORONATINE INSENSITIVE1-dependent and independent pathways in Arabidopsis thaliana.

Izabela Ruduś, Haruka Terai, Takafumi Shimizu, Hisae Kojima, Kazuki Hattori, Yuka Nishimori, Hironaka Tsukagoshi, Yuji Kamiya, Mitsunori Seo, Kenzo Nakamura and 2 more

Abstract read
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In one paragraph

Article in Plant cell reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

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  11. Silencing of the Ortholog ofInternational journal of molecular sciences · 2020
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  13. iTRAQ-Based Quantitative Proteomic Analysis of the Arabidopsis MutantInternational journal of molecular sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Izabela RuduśDepartment of Biological Mechanisms and Functions, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, 464-8601, Japan.
Haruka Terai
Takafumi Shimizu
Hisae Kojima
Kazuki Hattori
Yuka Nishimori
Hironaka Tsukagoshi
Yuji Kamiya
Mitsunori Seo
Kenzo Nakamura
Jan Kępczyński
Sumie Ishiguro
Nagoya University · JPRIKEN Center for Sustainable Resource Science · JPChubu University · JPUniversity of Szczecin · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Endogenous JA production is not necessary for wound-induced expression of JA-biosynthetic lipase genes such as DAD1 in Arabidopsis. However, the JA-Ile receptor COI1 is often required for their JA-independent induction. Wounding is a serious event in plants that may result from insect feeding and increase the risk of pathogen infection. Wounded plants produce high amounts of jasmonic acid (JA), which triggers the expression of insect and pathogen resistance genes. We focused on the transcriptional regulation of DEFECTIVE IN ANTHER DEHISCENCE1 and six of its homologs including DONGLE (DGL) in Arabidopsis, which encode lipases involved in JA biosynthesis. Plants constitutively expressing DAD1 accumulated a higher amount of JA than control plants after wounding, indicating that the expression of these lipase genes contributes to determining JA levels. We found that the expression of DAD1, DGL, and other DAD1-LIKE LIPASE (DALL) genes is induced upon wounding. Some DALLs were also expressed in unwounded leaves. Further experiments using JA-biosynthetic and JA-response mutants revealed that the wound induction of these genes is regulated by several distinct pathways. DAD1 and most of its homologs other than DALL4 were fully induced without relying on endogenous JA-Ile production and were only partly affected by JA deficiency, indicating that positive feedback by JA is not necessary for induction of these genes. However, DAD1 and DGL required CORONATINE INSENSITIVE1 (COI1) for their expression, suggesting that a molecule other than JA might act as a regulator of COI1. Wound induction of DALL1, DALL2, and DALL3 did not require COI1. This differential regulation of DAD1 and its homologs might explain their functions at different time points after wounding.

Indexed as

Gene Expression Regulation, PlantArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCyclopentanesGenes, ReporterLipaseOxylipinsPhospholipases APhospholipases A1Plant Growth RegulatorsPlant LeavesRNA, MessengerRNA, PlantWounds and InjuriesArabidopsis ProteinsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCOI1 protein, ArabidopsisCyclopentanesDAD1 protein, ArabidopsisDONGLE protein, Arabidopsisjasmonic acidLipaseMYC2 protein, ArabidopsisOxylipinsPhospholipases APhospholipases A1Plant Growth RegulatorsRNA, MessengerRNA, Plant

Identifiers

PMID24430866
OpenAlexW1994851408

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.