Evidence map›Paper›PMID 24429703›Full record

ArticleNature communications2014

Heterogeneity of genomic evolution and mutational profiles in multiple myeloma.

Niccolo Bolli, Hervé Avet-Loiseau, David C Wedge, Peter Van Loo, Ludmil B Alexandrov, Inigo Martincorena, Kevin J Dawson, Francesco Iorio, Serena Nik-Zainal, Graham R Bignell and 25 more

2 registry-linked trialsOpen access · bronzeAbstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 573 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
573citing papers in PubMed, 3 pooled it
53.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03421132 active not recruitingnot on this mapstarted 2018, after this paper: background citation

The Terry Fox Pan-Canadian Multiple Myeloma Molecular Monitoring Study

TypeobservationalSponsorHorizon Health NetworkRan2018 to 2026Enrolled96ConditionsMultiple Myeloma
NCT04873427 terminatednot on this mapstarted 2021, after this paper: background citation

In Situ Clonal Heterogeneity in Prostatic Diagnostic Biopsies: Impact on Prostate Cancer Evolution and Clinical Outcome. A Retrospective, Proof of Concept Study

TypeobservationalSponsorClinica Luganese MoncuccoRan2021 to 2023Enrolled40ConditionsProstate Cancer, Genetic PredispositionArmsclonal heterogeneity evaluation
3 · Its place in the literature

Who cites it

573 citing papers in PubMed, 3 syntheses or guidelines pooled it, 895 citations in OpenAlex.

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513 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 8 institutions in 3 countries.

Niccolo Bolli1] Cancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK [2] Department of Haematology, University of Cambridge, CIMR, Cambridge CB2 0XY, UK.
Hervé Avet-Loiseau1] Unité de Génomique du Myélome, CHU Rangueil, Toulouse 31059, France [2] CRCT, INSERM U1037, Toulouse 31400, France.
David C WedgeCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Peter Van Loo1] Cancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK [2] Department of Human Genetics, VIB and University of Leuven, Leuven 3000, Belgium.
Ludmil B AlexandrovCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Inigo MartincorenaCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Kevin J DawsonCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Francesco Iorio1] Cancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK [2] European Molecular Biology Laboratory-European Bioinformatics Institute, Hinxton CB10 1SA, UK.
Serena Nik-Zainal1] Cancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK [2] Department of Medical Genetics, Addenbrooke's Hospital NHS Trust, Cambridge CB2 0QQ, UK.
Graham R BignellCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Jonathan W HintonCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Yilong LiCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Jose M C TubioCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Stuart McLarenCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Sarah O' MearaCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Adam P ButlerCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Jon W TeagueCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Laura MudieCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Elizabeth AndersonCancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK.
Naim RashidLebow Institute of Myeloma Therapeutics and Jerome Lipper Multiple Myeloma Center, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115, USA.
Yu-Tzu TaiLebow Institute of Myeloma Therapeutics and Jerome Lipper Multiple Myeloma Center, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115, USA.
Masood A Shammas1] Lebow Institute of Myeloma Therapeutics and Jerome Lipper Multiple Myeloma Center, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115, USA [2] Boston Veterans Administration Healthcare System, West Roxbury, Massachusetts 02132, USA.
Adam S SperlingLebow Institute of Myeloma Therapeutics and Jerome Lipper Multiple Myeloma Center, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115, USA.
Mariateresa FulcinitiLebow Institute of Myeloma Therapeutics and Jerome Lipper Multiple Myeloma Center, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115, USA.
Paul G RichardsonLebow Institute of Myeloma Therapeutics and Jerome Lipper Multiple Myeloma Center, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115, USA.
Giovanni ParmigianiDana-Farber Cancer Institute and Harvard School of Public Health, Boston, Massachusetts 02115, USA.
Florence Magrangeas1] Center for Cancer Research Nantes-Angers, UMR 892 Inserm-6299 CNRS-University of Nantes, IRS-UN, Nantes 4407, France [2] UMGC, University Hospital, Nantes 44093, France.
Stephane Minvielle1] Center for Cancer Research Nantes-Angers, UMR 892 Inserm-6299 CNRS-University of Nantes, IRS-UN, Nantes 4407, France [2] UMGC, University Hospital, Nantes 44093, France.
Philippe MoreauDepartment of Hematology, University Hospital, Nantes 44093, France.
Michel AttalDepartment of Hematology, University Hospital and CRCT, INSERM U1037, Toulouse 31400, France.
Thierry FaconDepartment of Hematology, University Hospital, Lille 59045, France.
P Andrew Futreal1] Cancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK [2].
Kenneth C AndersonLebow Institute of Myeloma Therapeutics and Jerome Lipper Multiple Myeloma Center, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115, USA.
Peter J Campbell1] Cancer Genome Project, Wellcome Trust Sanger Institute, Hinxton CB10 1SA, UK [2] Department of Haematology, University of Cambridge, CIMR, Cambridge CB2 0XY, UK.
Nikhil C Munshi1] Lebow Institute of Myeloma Therapeutics and Jerome Lipper Multiple Myeloma Center, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115, USA [2] Boston Veterans Administration Healthcare System, West Roxbury, Massachusetts 02132, USA.
Wellcome Sanger Institute · GBDana-Farber Cancer Institute · USCentre de Recherche en Cancérologie et Immunologie Intégrée Nantes Angers · FRCentre de Recherche en Cancérologie de Toulouse · FRHôpital Rangueil · FRLille’s Cardiology Hospital · FRUniversity of Cambridge · GBVA Boston Healthcare System · US

Funding

Trageting the Multiple Myeloma EpigenomeP50CA100707 · NCI · DANA-FARBER CANCER INSTITUTE · PI ANDERSON, KENNETH C., MUNSHI, NIKHIL C. · 2003 to 2023
$45.0M
Targeting Genomic Instability and Evolution in MyelomaP01CA155258 · NCI · DANA-FARBER CANCER INST · PI Jill Corre · 2011 to 2026
$32.5M
Targeting Myeloma Cell-Host Bone Marrow InteractionsP01CA078378 · NCI · DANA-FARBER CANCER INSTITUTE · PI WELLER, EDIE A · 1998 to 2014
$26.2M
Biostatistics for Research in Genomics and CancerT32CA106209 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI JOSEPH G IBRAHIM, Naim Ur Rashid · 2004 to 2026
$4.8M
Telomerase And Homologous Recombination As Targets In Barrett's AdenocarcinomaR01CA125711 · NCI · WAYNE STATE UNIVERSITY · PI SHAMMAS, MASOOD A · 2008 to 2012
$1.7M
MOLECULAR MANIPULATION TO ENHANCE ANTI-MYELOMA RESPONSEI01BX001584 · VA · VA BOSTON HEALTH CARE SYSTEM · PI MUNSHI, NIKHIL C. · 2013 to 2025
–
BLRD VA I01 BX001584NCI NIH HHS P01 CA078378NCI NIH HHS P01 CA155258NCI NIH HHS P50 CA100707NCI NIH HHS R01 CA125711NCI NIH HHS T32 CA106209PHS HHS P01-155258PHS HHS P01-78378PHS HHS P50-100007PHS HHS R01-124929PHS HHS RCA125711CWellcome Trust 077012/Z/05/ZWellcome Trust 088340
6 · The paper itself

Abstract

Multiple myeloma is an incurable plasma cell malignancy with a complex and incompletely understood molecular pathogenesis. Here we use whole-exome sequencing, copy-number profiling and cytogenetics to analyse 84 myeloma samples. Most cases have a complex subclonal structure and show clusters of subclonal variants, including subclonal driver mutations. Serial sampling reveals diverse patterns of clonal evolution, including linear evolution, differential clonal response and branching evolution. Diverse processes contribute to the mutational repertoire, including kataegis and somatic hypermutation, and their relative contribution changes over time. We find heterogeneity of mutational spectrum across samples, with few recurrent genes. We identify new candidate genes, including truncations of SP140, LTB, ROBO1 and clustered missense mutations in EGR1. The myeloma genome is heterogeneous across the cohort, and exhibits diversity in clonal admixture and in dynamics of evolution, which may impact prognostic stratification, therapeutic approaches and assessment of disease response to treatment.

Indexed as

ExomeAdultAgedAntigens, NuclearCohort StudiesDNA Copy Number VariationsEarly Growth Response Protein 1Evolution, MolecularGenetic HeterogeneityGTP PhosphohydrolasesHumansLymphotoxin-betaMembrane ProteinsMiddle AgedMultiple MyelomaMutationAntigens, NuclearBRAF protein, humanEarly Growth Response Protein 1EGR1 protein, humanGTP PhosphohydrolasesKRAS protein, humanLTB protein, humanLymphotoxin-betaMembrane ProteinsNerve Tissue ProteinsNRAS protein, humanProto-Oncogene ProteinsProto-Oncogene Proteins B-rafProto-Oncogene Proteins p21(ras)ras ProteinsReceptors, ImmunologicRoundabout ProteinsSP140 protein, humanTP53 protein, humanTranscription FactorsTumor Suppressor Protein p53

Identifiers

PMID24429703
PMCPMC3905727
OpenAlexW2104195581

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.