Evidence map›Paper›PMID 24428326›Full record

ArticleJournal of the American Chemical Society2014

Flash memory: photochemical imprinting of neuronal action potentials onto a microbial rhodopsin.

Veena Venkatachalam, Daan Brinks, Dougal Maclaurin, Daniel Hochbaum, Joel Kralj, Adam E Cohen

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Current Status and Future Strategies for Advancing Functional Circuit MappingThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Imaging Voltage with Microbial Rhodopsins.Frontiers in molecular biosciences · 2021
    Review
  9. Article
  10. Article
  11. Article
  12. Voltage imaging with genetically encoded indicators.Current opinion in chemical biology · 2017
    Review
  13. Roadmap on neurophotonics.Journal of optics (2010) · 2016
    Article
  14. Review
  15. Design and Synthesis of a Calcium-Sensitive Photocage.Angewandte Chemie (International ed. in English) · 2016
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Veena VenkatachalamDepartments of †Chemistry and Chemical Biology, ‡Physics, and §School of Engineering and Applied Sciences, Harvard University , Cambridge, Massachusetts 02138, United States.
Daan Brinks
Dougal Maclaurin
Daniel Hochbaum
Joel Kralj
Adam E Cohen
Harvard University · US

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Optical sensing of voltage, pH, and small molecules using microbial rhodopsinsDP2OD007428 · OD · HARVARD UNIVERSITY · PI COHEN, ADAM EZRA · 2010 to 2010
$2.5M
Engineering Microbial Rhodopsins as Optical Voltage SensorsR01EB012498 · NIBIB · HARVARD UNIVERSITY · PI COHEN, ADAM EZRA · 2011 to 2014
$1.5M
NIBIB NIH HHS 1-R01-EB012498-01NIBIB NIH HHS R01 EB012498NIGMS NIH HHS T32 GM007753NIGMS NIH HHS T32GM07753-33NIH HHS 1-DP2-OD007428NIH HHS DP2 OD007428
6 · The paper itself

Abstract

We developed a technique, "flash memory", to record a photochemical imprint of the activity state--firing or not firing--of a neuron at a user-selected moment in time. The key element is an engineered microbial rhodopsin protein with three states. Two nonfluorescent states, D1 and D2, exist in a voltage-dependent equilibrium. A stable fluorescent state, F, is reached by a photochemical conversion from D2. When exposed to light of a wavelength λ(write), population transfers from D2 to F, at a rate determined by the D1 ⇌ D2 equilibrium. The population of F maintains a record of membrane voltage which persists in the dark. Illumination at a later time at a wavelength λ(read) excites fluorescence of F, probing this record. An optional third flash at a wavelength λ(reset) converts F back to D2, for a subsequent write-read cycle. The flash memory method offers the promise to decouple the recording of neural activity from its readout. In principle, the technique may enable one to generate snapshots of neural activity in a large volume of neural tissue, e.g., a complete mouse brain, by circumventing the challenge of imaging a large volume with simultaneous high spatial and high temporal resolution. The proof-of-principle flash memory sensors presented here will need improvements in sensitivity, speed, brightness, and membrane trafficking before this goal can be realized.

Indexed as

LightMolecular ImprintingProtein EngineeringAction PotentialsAnimalsHEK293 CellsHumansMaterials TestingMiceMutationPhotochemistryRhodopsins, MicrobialSemiconductorsRhodopsins, Microbial

Identifiers

PMID24428326
PMCPMC3985752
OpenAlexW2014639465

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.