Evidence map›Paper›PMID 24426299›Full record

ArticleIndian journal of virology : an official organ of Indian Virological Society2013

Changes in the NS1 gene of avian influenza viruses isolated in Thailand affect expression of type I interferon in primary chicken embryonic fibroblast cells.

Chutamas Thepmalee, Phanchana Sanguansermsri, Naratchala Suwanankhon, Chanpen Chamnanpood, Pornchai Chamnanpood, Sutatip Pongcharoen, Pannika R Niumsap, Damratsamon Surangkul, Donruedee Sanguansermsri

Open access · bronzeAbstract read
In one paragraph

Article in Indian journal of virology : an official organ of Indian Virological Society, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact, top 89% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Chutamas ThepmaleeDepartment of Biochemistry, Faculty of Medical Sciences, Naresuan University, Phitsanulok, 65000 Thailand ; Department of Biochemistry, Faculty of Medical Sciences, University of Phayao, Phayao, 56000 Thailand.
Phanchana SanguansermsriDepartment of Biochemistry, Faculty of Medical Sciences, Naresuan University, Phitsanulok, 65000 Thailand.
Naratchala SuwanankhonDepartment of Biochemistry, Faculty of Medical Sciences, Naresuan University, Phitsanulok, 65000 Thailand ; Department of Biology, Faculty of Sciences, University of Phayao, Phayao, 56000 Thailand.
Chanpen ChamnanpoodVeterinary Research and Development Centre Lower Northern Region, Phitsanulok, 65130 Thailand.
Pornchai ChamnanpoodRegional Livestock Office 6th, Phitsanulok, 65000 Thailand.
Sutatip PongcharoenDepartment of Medicine, Faculty of Medicine, Naresuan University, Phitsanulok, 65000 Thailand.
Pannika R NiumsapDepartment of Microbiology and Parasitology, Faculty of Medical Sciences, Naresuan University, Phitsanulok, 65000 Thailand.
Damratsamon SurangkulDepartment of Biochemistry, Faculty of Medical Sciences, Naresuan University, Phitsanulok, 65000 Thailand.
Donruedee SanguansermsriDepartment of Microbiology and Parasitology, Faculty of Medical Sciences, Naresuan University, Phitsanulok, 65000 Thailand ; Centre of Excellence in Medical Biotechnology, Faculty of Medical Sciences, Naresuan University, Phitsanulok, 65000 Thailand.
Naresuan University · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The non-structural protein 1 (NS1) of avian influenza virus was defined as one of the virulent factors. To understand the effect of NS1 protein of influenza virus H5N1 isolated in Thailand on type I (α/β) interferon (IFN) synthesis, five reverse genetic viruses were constructed and used as models. The viruses were generated using NS genomic segment from A/Peurto Rico/8/1934 (H1N1) and four avian influenza viruses isolated from the first outbreak in Thailand. All the viruses have the rest of the genome from A/Peurto Rico/8/1934 (H1N1). The constructed viruses were named (1) NS1 PR8/34, (2) NS1 wild type, (3) NS1 L15FD53G, (4) NS1 N171I and (5) NS1 E71K, respectively. The type I (α/β) IFN gene expression in control and infected primary chicken embryonic fibroblast cells were analyzed by quantitative polymerase chain reaction. The results show that the inhibition of IFN-β gene expression by NS1 wild type infected cells is stronger than NS1 N171I, NS1 E71K, NS1 PR8/34 and NS1 L15FD53G, respectively. The data suggest that the difference of amino acid sequence of NS1 protein contributes to the IFN-β antagonist. In contrast, the difference of the NS1 protein does not influence in the IFN-α antagonistic activity.

Indexed as

Avian influenza virusH5N1Non structural 1 proteinReverse genetic virusType I interferon

Identifiers

PMID24426299
PMCPMC3832696
OpenAlexW2054605754

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.