Evidence map›Paper›PMID 24426285›Full record

ArticleIndian journal of virology : an official organ of Indian Virological Society2013

Rapid detection of human rotavirus using NSP4 gene specific reverse transcription loop-mediated isothermal amplification assay.

Yashpal Singh Malik, Kuldeep Sharma, Naveen Kumar, Sathish B Shivachandra, Vinita Rawat, Ritu Rakholia, Rajeev Ranjan, Balasubramanian Ganesh, Manmohan Parida

Open access · bronzeAbstract read
In one paragraph

Article in Indian journal of virology : an official organ of Indian Virological Society, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Yashpal Singh MalikIndian Veterinary Research Institute, Bareilly, Uttar Pradesh India.
Kuldeep SharmaIndian Veterinary Research Institute, Bareilly, Uttar Pradesh India.
Naveen KumarIndian Veterinary Research Institute, Bareilly, Uttar Pradesh India.
Sathish B ShivachandraIndian Veterinary Research Institute, Bareilly, Uttar Pradesh India.
Vinita RawatGovernment Medical College, Haldwani, Uttarakhand India.
Ritu RakholiaGovernment Medical College, Haldwani, Uttarakhand India.
Rajeev RanjanProject Directorate on Foot and Mouth Disease, Mukteswar, Nainital, 263138 Uttarakhand India.
Balasubramanian GaneshDivision of Virology, National Institute of Cholera & Enteric Diseases (NICED), Indian Council of Medical Research (ICMR), P-33, C.I.T. Road, Scheme XM, Beliaghata, Kolkata, 700010 India.
Manmohan ParidaDefence R & D Establishment DRDE, DRDO, Ministry of Defence, Jhansi Road, Gwalior, 474002 Madhya Pradesh India.
Indian Veterinary Research Institute · INGovernment Medical College · INIndian Council of Medical Research · INProject Directorate on Foot and Mouth Disease · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The seasonal outbreaks of human rotavirus (RV) infection occur every winter. Most patients are diagnosed clinically by a rapid latex agglutination detection kit or polymerase chain reaction assays for RV from stool samples, but some problems have been reported on the specificity and sensitivity of such rapid detection assays. To ratify these issues, a sensitive, specific, simple, and rapid nucleic acid based diagnostic method is expected to be introduced and the reverse transcription loop-mediated isothermal amplification (RT-LAMP) was developed to detect the RV in human stool samples by incubation at 60 °C for 1 h and amplification was confirmed by electrophoretic laddering, restriction enzyme digestion, and hydroxynapthol blue discoloration. The assay established in this study was found to detect only the RVs and no cross-reaction with other viruses, demonstrating its high specificity. By using serial samples dilution as template, the detection limit of LAMP was 10 times more than that of PCR. The results showed the potential clinical feasibility of RT-LAMP as a useful diagnostic tool for the detection of RV with high sensitivity in comparison to conventional RT-PCR.

Indexed as

Group AHumanNSP4 geneRotavirusRT-LAMP

Identifiers

PMID24426285
PMCPMC3784908
OpenAlexW1993154302

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.