Evidence map›Paper›PMID 24426162›Full record

ArticleIndian journal of microbiology2014

Cloning and Characterizing the Thermophilic and Detergent Stable Cellulase CelMytB from Saccharophagus sp. Myt-1.

Akihiro Sakatoku, Daisuke Tanaka, Hiroyuki Kamachi, Shogo Nakamura

Abstract read
In one paragraph

Article in Indian journal of microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

4 authors.

Akihiro SakatokuDepartment of Environmental and Energy Science, Faculty of Earth and Environmental Systems, Graduate School of Science and Engineering, University of Toyama, Toyama, 930-8555 Japan.
Daisuke TanakaDepartment of Environmental and Energy Science, Faculty of Earth and Environmental Systems, Graduate School of Science and Engineering, University of Toyama, Toyama, 930-8555 Japan.
Hiroyuki KamachiDepartment of Environmental and Energy Science, Faculty of Earth and Environmental Systems, Graduate School of Science and Engineering, University of Toyama, Toyama, 930-8555 Japan.
Shogo NakamuraDepartment of Environmental and Energy Science, Faculty of Earth and Environmental Systems, Graduate School of Science and Engineering, University of Toyama, Toyama, 930-8555 Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We previously isolated and reported a second species of the Saccharophagus genus, Saccharophagus sp. strain Myt-1. In the present study, a cellulase gene (celMytB) from the genomic DNA of Myt-1 was cloned and characterized. The DNA sequence fragment contained an open reading frame of 1,893 bp that encoded a protein of 631 amino acids with an estimated molecular mass of 66.8 kDa. The deduced protein, CelMytB, had a catalytic domain that contained a conserved signature sequence (VIYEIYNEPL) of glycosyl hydrolase family 5 and a CBM6 cellulose binding module. CelMytB showed optimal activity at 55 °C and pH 6.5, which is similar to the optimal temperature and pH profile of cel5H, an endoglucanase from the closely related S. degradans 2-40. However, the cellulase (degradation of soluble cellulose) and avicelase (degradation of crystalline cellulose) activities of CelMytB were about 3-fold and 100-fold higher, respectively, than the equivalent activities of cel5H. Moreover, CelMytB could degrade xylan. From the zymogram results, we speculated that the catalytic domain of CelMytB had high activity even without the cellulose binding module. The presence of some detergents stimulated the cellulase activity of CelMytB.

Indexed as

CellulaseDetergent stableSaccharophagus sp. Myt-1ThermophilicXylanase

Identifiers

PMID24426162
PMCPMC3889849

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