Evidence map›Paper›PMID 24423871›Full record

ArticleNucleic acids research2014

Cellular localization and dynamics of the Mrr type IV restriction endonuclease of Escherichia coli.

Anirban Ghosh, Ioannis Passaris, Mehari Tesfazgi Mebrhatu, Susana Rocha, Kristof Vanoirbeek, Johan Hofkens, Abram Aertsen

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Anirban GhoshDepartment of Microbial and Molecular Systems (M2S), Laboratory of Food Microbiology, KU Leuven, B-3001 Leuven, Belgium and Department of Chemistry, KU Leuven, B-3001 Leuven, Belgium.
Ioannis Passaris
Mehari Tesfazgi Mebrhatu
Susana Rocha
Kristof Vanoirbeek
Johan Hofkens
Abram Aertsen
KU Leuven · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we examined the intracellular whereabouts of Mrr, a cryptic type IV restriction endonuclease of Escherichia coli K12, in response to different conditions. In absence of stimuli triggering its activity, Mrr was found to be strongly associated with the nucleoid as a number of discrete foci, suggesting the presence of Mrr hotspots on the chromosome. Previously established elicitors of Mrr activity, such as exposure to high (hydrostatic) pressure (HP) or expression of the HhaII methyltransferase, both caused nucleoid condensation and an unexpected coalescence of Mrr foci. However, although the resulting Mrr/nucleoid complex was stable when triggered with HhaII, it tended to be only short-lived when elicited with HP. Moreover, HP-mediated activation of Mrr typically led to cellular blebbing, suggesting a link between chromosome and cellular integrity. Interestingly, Mrr variants could be isolated that were specifically compromised in either HhaII- or HP-dependent activation, underscoring a mechanistic difference in the way both triggers activate Mrr. In general, our results reveal that Mrr can take part in complex spatial distributions on the nucleoid and can be engaged in distinct modes of activity.

Indexed as

Deoxyribonucleases, Type III Site-SpecificDeoxyribonucleases, Type II Site-SpecificDNA Restriction EnzymesEscherichia coli ProteinsHydrostatic PressureMutationDeoxyribonucleases, Type III Site-SpecificDeoxyribonucleases, Type II Site-SpecificDNA Restriction EnzymesEscherichia coli ProteinsGANTC-specific type II deoxyribonucleasesMrr protein, E coli

Identifiers

PMID24423871
PMCPMC3973329
OpenAlexW2157677255

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.