Evidence map›Paper›PMID 24421880›Full record

ArticlePloS one2014

The covert world of fish biofluorescence: a phylogenetically widespread and phenotypically variable phenomenon.

John S Sparks, Robert C Schelly, W Leo Smith, Matthew P Davis, Dan Tchernov, Vincent A Pieribone, David F Gruber

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

John S SparksDepartment of Ichthyology, American Museum of Natural History, Division of Vertebrate Zoology, New York, New York United States of America ; Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York, United States of America.
Robert C SchellyDepartment of Ichthyology, American Museum of Natural History, Division of Vertebrate Zoology, New York, New York United States of America ; Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York, United States of America.
W Leo SmithBiodiversity Institute, University of Kansas, Lawrence, Kansas, United States of America.
Matthew P DavisBiodiversity Institute, University of Kansas, Lawrence, Kansas, United States of America.
Dan TchernovMarine Biology Department, The Leon H. Charney School of Marine Sciences, University of Haifa, Mount Carmel, Haifa, Israel.
Vincent A PieriboneDepartment of Ichthyology, American Museum of Natural History, Division of Vertebrate Zoology, New York, New York United States of America ; Department of Cellular and Molecular Physiology, The John B. Pierce Laboratory, Inc., Yale University, New Haven, Connecticut, United States of America.
David F GruberSackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York, United States of America ; Department of Natural Sciences, Baruch College, City University of New York, New York, New York, United States of America.

Funding

Scan of Protein Space for Optical Voltage ProbesU24NS057631 · NINDS · YALE UNIVERSITY · PI COHEN, LAWRENCE B · 2007 to 2011
$5.2M
High-Speed, wide field fluorescent imaging of cortex in freely moving animalsR01NS065110 · NINDS · JOHN B. PIERCE LABORATORY, INC. · PI CULURCIELLO, EUGENIO, PIERIBONE, VINCENT A · 2009 to 2015
$3.7M
Genetically-Encoded Voltage Probe DevelopmentR01NS083875 · NINDS · JOHN B. PIERCE LABORATORY, INC. · PI HUGHES, THOMAS E, NITABACH, MICHAEL · 2013 to 2016
$2.3M
NINDS NIH HHS R01 NS065110NINDS NIH HHS R01 NS083875NINDS NIH HHS R01NS083875NINDS NIH HHS U24 NS057631NINDS NIH HHS U24NS057631
6 · The paper itself

Abstract

The discovery of fluorescent proteins has revolutionized experimental biology. Whereas the majority of fluorescent proteins have been identified from cnidarians, recently several fluorescent proteins have been isolated across the animal tree of life. Here we show that biofluorescence is not only phylogenetically widespread, but is also phenotypically variable across both cartilaginous and bony fishes, highlighting its evolutionary history and the possibility for discovery of numerous novel fluorescent proteins. Fish biofluorescence is especially common and morphologically variable in cryptically patterned coral-reef lineages. We identified 16 orders, 50 families, 105 genera, and more than 180 species of biofluorescent fishes. We have also reconstructed our current understanding of the phylogenetic distribution of biofluorescence for ray-finned fishes. The presence of yellow long-pass intraocular filters in many biofluorescent fish lineages and the substantive color vision capabilities of coral-reef fishes suggest that they are capable of detecting fluoresced light. We present species-specific emission patterns among closely related species, indicating that biofluorescence potentially functions in intraspecific communication and evidence that fluorescence can be used for camouflage. This research provides insight into the distribution, evolution, and phenotypic variability of biofluorescence in marine lineages and examines the role this variation may play.

Indexed as

PhylogenyAnimalsCoral ReefsFishesFluorescenceMelanesiaPhenotypePigmentationSpecies SpecificityVideo Recording

Identifiers

PMID24421880
PMCPMC3885428

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.