Evidence map›Paper›PMID 24420577›Full record

ArticleJournal of experimental botany2014

Salicylic acid is an indispensable component of the Ny-1 resistance-gene-mediated response against Potato virus Y infection in potato.

Š Baebler, K Witek, M Petek, K Stare, M Tušek-Žnidarič, M Pompe-Novak, J Renaut, K Szajko, D Strzelczyk-Żyta, W Marczewski and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 1 pooled it
17.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 1 synthesis or guideline pooled it, 142 citations in OpenAlex.

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  17. Genome resequencing reveals genetic loci and genes conferring resistance to SMV-SC8 in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
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8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Š BaeblerNational Institute of Biology, Večna pot 111, 1000 Ljubljana, Slovenia.
K Witek
M Petek
K Stare
M Tušek-Žnidarič
M Pompe-Novak
J Renaut
K Szajko
D Strzelczyk-Żyta
W Marczewski
K Morgiewicz
K Gruden
J Hennig
National Institute of Biology · SIInstitute of Biochemistry and Biophysics, Polish Academy of Sciences · PLPlant Breeding and Acclimatization Institute - National Research Institute · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The purpose of the study was to investigate the role of salicylic acid (SA) signalling in Ny-1-mediated hypersensitive resistance (HR) of potato (Solanum tuberosum L.) to Potato virus Y (PVY). The responses of the Ny-1 allele in the Rywal potato cultivar and transgenic NahG-Rywal potato plants that do not accumulate SA were characterized at the cytological, biochemical, transcriptome, and proteome levels. Analysis of noninoculated and inoculated leaves revealed that HR lesions started to develop from 3 d post inoculation and completely restricted the virus spread. At the cytological level, features of programmed cell death in combination with reactive oxygen species burst were observed. In response to PVY infection, SA was synthesized de novo. The lack of SA accumulation in the NahG plants led to the disease phenotype due to unrestricted viral spreading. Grafting experiments show that SA has a critical role in the inhibition of PVY spreading in parenchymal tissue, but not in vascular veins. The whole transcriptome analysis confirmed the central role of SA in orchestrating Ny-1-mediated responses and showed that the absence of SA leads to significant changes at the transcriptome level, including a delay in activation of expression of genes known to participate in defence responses. Moreover, perturbations in the expression of hormonal signalling genes were detected, shown as a switch from SA to jasmonic acid/ethylene signalling. Viral multiplication in the NahG plants was accompanied by downregulation of photosynthesis genes and activation of multiple energy-producing pathways.

Indexed as

TranscriptomeApoptosisCyclopentanesDown-RegulationEnergy MetabolismEthylenesGene Expression Regulation, PlantHost-Pathogen InteractionsOxylipinsPhotosynthesisPlant DiseasesPlant Growth RegulatorsPlant ImmunityPlant LeavesPlant ProteinsPotyvirusCyclopentanesethyleneEthylenesjasmonic acidOxylipinsPlant Growth RegulatorsPlant ProteinsReactive Oxygen SpeciesSalicylic AcidPlant–pathogen interactionsPotato virus YPotyviridaesalicylic acidSolanum tuberosumwhole transcriptome analysis.

Identifiers

PMID24420577
PMCPMC3935562
OpenAlexW2113360637

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.