Evidence map›Paper›PMID 24418891›Full record

ArticleRNA biology2013

Length variants of the 5' untranslated region of p53 mRNA and their impact on the efficiency of translation initiation of p53 and its N-truncated isoform ΔNp53.

Agnieszka Górska, Leszek Błaszczyk, Mariola Dutkiewicz, Jerzy Ciesiołka

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 17 citations in OpenAlex.

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  10. Translational Control inInternational journal of molecular sciences · 2019
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Agnieszka GórskaInstitute of Bioorganic Chemistry; Polish Academy of Sciences; Noskowskiego 12/14; Poznan, Poland.
Leszek BłaszczykInstitute of Bioorganic Chemistry; Polish Academy of Sciences; Noskowskiego 12/14; Poznan, Poland.
Mariola DutkiewiczInstitute of Bioorganic Chemistry; Polish Academy of Sciences; Noskowskiego 12/14; Poznan, Poland.
Jerzy CiesiołkaInstitute of Bioorganic Chemistry; Polish Academy of Sciences; Noskowskiego 12/14; Poznan, Poland.
Institute of Bioorganic Chemistry, Polish Academy of Sciences · PLPolish Academy of Sciences · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, we have determined the secondary structure of the 5'-terminal region of p53 mRNA that starts from the P1 transcription initiation site and includes two major translation initiation codons responsible for the synthesis of p53 and ΔNp53 isoform. Here, we showed that when this region was extended into 5' direction to the P0 transcription start site, the two characteristic hairpin motifs found in this region were preserved. Moreover, the presence of alternatively spliced intron 2 did not interfere with the formation of the larger hairpin in which the initiation codon for p53 was embedded. The impact of the different variants of p53 5'-terminal region, which start at P0 or P1 site and end with the initiation codon for p53 or ΔNp53, on the translation of luciferase reporter protein was compared. Strikingly, the efficiency of translation performed in rabbit reticulocyte lysate differed by two orders of magnitude. The toe-printing analysis was also applied to investigate the formation of the ribosomal complex on the model mRNA constructs. The relative translation efficiencies in HeLa and MCF-7 cells were similar to those observed in the cell lysate, although some differences were noted in comparison with cell-free conditions. The results were discussed in terms of the role of secondary structure folding of the 5'-terminal region of p53 mRNA in translation and possible modes of p53 and ΔNp53 translation initiation.

Indexed as

5' Untranslated RegionsAlternative SplicingAnimalsCodon, InitiatorHeLa CellsHumansIntronsMCF-7 CellsModels, GeneticMolecular ConformationNucleic Acid ConformationNucleotide MotifsPeptide Chain Initiation, TranslationalRabbitsRNA FoldingRNA Isoforms5' Untranslated RegionsCodon, InitiatorRNA IsoformsRNA, MessengerTP53 protein, humanTumor Suppressor Protein p535′ non-coding region5′ untranslated regionp53 isoformp53 mRNARNA structuretranslation initiation

Identifiers

PMID24418891
PMCPMC3907482
OpenAlexW2018912959

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.