Evidence map›Paper›PMID 24417952›Full record

ArticleMolecular plant pathology2014

Transgenic Brassica rapa plants over-expressing eIF(iso)4E variants show broad-spectrum Turnip mosaic virus (TuMV) resistance.

Jinhee Kim, Won-Hee Kang, Jeena Hwang, Hee-Bum Yang, Kim Dosun, Chang-Sik Oh, Byoung-Cheorl Kang

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant pathology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
6.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
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  9. Resistance to Turnip Mosaic Virus in the FamilyThe plant pathology journal · 2021
    Review
  10. Article
  11. Genome Editing ofFrontiers in plant science · 2020
    Article
  12. Review
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  19. Review
  20. Mechanism of cytoplasmic mRNA translation.The arabidopsis book · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Jinhee KimDepartment of Plant Science, Plant Genomics and Breeding Institute, and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, 151-921, South Korea.
Won-Hee Kang
Jeena Hwang
Hee-Bum Yang
Kim Dosun
Chang-Sik Oh
Byoung-Cheorl Kang
Seoul National University · KRKyung Hee University · KRNational Horticultural Research Institute · NG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The protein-protein interaction between VPg (viral protein genome-linked) of potyviruses and eIF4E (eukaryotic initiation factor 4E) or eIF(iso)4E of their host plants is a critical step in determining viral virulence. In this study, we evaluated the approach of engineering broad-spectrum resistance in Chinese cabbage (Brassica rapa) to Turnip mosaic virus (TuMV), which is one of the most important potyviruses, by a systematic knowledge-based approach to interrupt the interaction between TuMV VPg and B. rapa eIF(iso)4E. The seven amino acids in the cap-binding pocket of eIF(iso)4E were selected on the basis of other previous results and comparison of protein models of cap-binding pockets, and mutated. Yeast two-hybrid assay and co-immunoprecipitation analysis demonstrated that W95L, K150L and W95L/K150E amino acid mutations of B. rapa eIF(iso)4E interrupted its interaction with TuMV VPg. All eIF(iso)4E mutants were able to complement an eIF4E-knockout yeast strain, indicating that the mutated eIF(iso)4E proteins retained their function as a translational initiation factor. To determine whether these mutations could confer resistance, eIF(iso)4E W95L, W95L/K150E and eIF(iso)4E wild-type were over-expressed in a susceptible Chinese cabbage cultivar. Evaluation of the TuMV resistance of T1 and T2 transformants demonstrated that the over-expression of the eIF(iso)4E mutant forms can confer resistance to multiple TuMV strains. These data demonstrate the utility of knowledge-based approaches for the engineering of broad-spectrum resistance in Chinese cabbage.

Indexed as

Amino Acid SequenceArabidopsis ProteinsBinding SitesBrassica rapaDisease ResistanceEukaryotic Initiation Factor-4EEukaryotic Initiation FactorsGenes, PlantGenetic VariationHost-Pathogen InteractionsModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedPlant DiseasesPlant ProteinsPlants, Genetically ModifiedArabidopsis ProteinseIF(iso)4E protein, ArabidopsisEukaryotic Initiation Factor-4EEukaryotic Initiation FactorsPlant ProteinsRecombinant ProteinsRNA Cap-Binding ProteinsViral Proteinsbroad-spectrum resistanceChinese cabbageeIF(iso)4Eplant transformationpotyvirusresistance breedingTuMV

Identifiers

PMID24417952
PMCPMC6638765
OpenAlexW2164234371

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.