Evidence map›Paper›PMID 24416306›Full record

ArticlePloS one2014

The non-JAZ TIFY protein TIFY8 from Arabidopsis thaliana is a transcriptional repressor.

Amparo Cuéllar Pérez, Astrid Nagels Durand, Robin Vanden Bossche, Rebecca De Clercq, Geert Persiau, Saskia C M Van Wees, Corné M J Pieterse, Kris Gevaert, Geert De Jaeger, Alain Goossens and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
6.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
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  4. Review
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  7. Understanding the Molecular Regulatory Networks of Seed Size in Soybean.International journal of molecular sciences · 2024
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  8. Site-directed mutagenesis of soybeanPlant biotechnology (Tokyo, Japan) · 2023
    Article
  9. The Non-JAZ TIFY Protein TIFY8 ofInternational journal of molecular sciences · 2023
    Article
  10. Article
  11. Interactome of Arabidopsis Thaliana.Plants (Basel, Switzerland) · 2022
    Article
  12. Article
  13. Article
  14. Transcriptome-Wide Identification and Characterization of theInternational journal of molecular sciences · 2021
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Functional Characterization of Resistance to Powdery Mildew ofInternational journal of molecular sciences · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Amparo Cuéllar PérezDepartment of Plant Systems Biology, VIB, Gent, Belgium ; Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium.
Astrid Nagels DurandDepartment of Plant Systems Biology, VIB, Gent, Belgium ; Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium.
Robin Vanden BosscheDepartment of Plant Systems Biology, VIB, Gent, Belgium ; Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium.
Rebecca De ClercqDepartment of Plant Systems Biology, VIB, Gent, Belgium ; Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium.
Geert PersiauDepartment of Plant Systems Biology, VIB, Gent, Belgium ; Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium.
Saskia C M Van WeesPlant-Microbe Interactions, Institute of Environmental Biology, Department of Biology, Faculty of Science, Utrecht University, Utrecht, The Netherlands.
Corné M J PietersePlant-Microbe Interactions, Institute of Environmental Biology, Department of Biology, Faculty of Science, Utrecht University, Utrecht, The Netherlands.
Kris GevaertDepartment of Medical Protein Research, VIB, Gent, Belgium ; Department of Biochemistry, Ghent University, Gent, Belgium.
Geert De JaegerDepartment of Plant Systems Biology, VIB, Gent, Belgium ; Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium.
Alain GoossensDepartment of Plant Systems Biology, VIB, Gent, Belgium ; Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium.
Laurens PauwelsDepartment of Plant Systems Biology, VIB, Gent, Belgium ; Department of Plant Biotechnology and Bioinformatics, Ghent University, Gent, Belgium.
VIB-UGent Center for Plant Systems Biology · BEGhent University · BEUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Jasmonate (JA) signalling is mediated by the JASMONATE-ZIM DOMAIN (JAZ) repressor proteins, which are degraded upon JA perception to release downstream responses. The ZIM protein domain is characteristic of the larger TIFY protein family. It is currently unknown if the atypical member TIFY8 is involved in JA signalling. Here we show that the TIFY8 ZIM domain is functional and mediated interaction with PEAPOD proteins and NINJA. TIFY8 interacted with TOPLESS through NINJA and accordingly acted as a transcriptional repressor. TIFY8 expression was inversely correlated with JAZ expression during development and after infection with Pseudomonas syringae. Nevertheless, transgenic lines with altered TIFY8 expression did not show changes in JA sensitivity. Despite the functional ZIM domain, no interaction with JAZ proteins could be found. In contrast, TIFY8 was found in protein complexes involved in regulation of dephosphorylation, deubiquitination and O-linked N-acetylglucosamine modification suggesting an important role in nuclear signal transduction.

Indexed as

ArabidopsisArabidopsis ProteinsCyclopentanesDNA, BacterialGene Expression Regulation, PlantOxylipinsPlant RootsPromoter Regions, GeneticProtein Structure, TertiaryPseudomonas syringaeRepressor ProteinsArabidopsis ProteinsCyclopentanesDNA, Bacterialjasmonic acidOxylipinsRepressor ProteinsT-DNATIFY8 protein, Arabidopsis

Identifiers

PMID24416306
PMCPMC3885651
OpenAlexW1987034020

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.