Evidence map›Paper›PMID 24416283›Full record

ArticlePloS one2014

Non-syndromic hearing impairment in India: high allelic heterogeneity among mutations in TMPRSS3, TMC1, USHIC, CDH23 and TMIE.

Aparna Ganapathy, Nishtha Pandey, C R Srikumari Srisailapathy, Rajeev Jalvi, Vikas Malhotra, Mohan Venkatappa, Arunima Chatterjee, Meenakshi Sharma, Rekha Santhanam, Shelly Chadha and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

  1. The p.P240L variant of CDH23 and the risk of nonsyndromic hearing loss: a meta-analysis.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2019
    Pooled it
  2. Article
  3. Article
  4. Knockout ofBiomedicines · 2024
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  9. Article
  10. Knockout ofBiomedicines · 2021
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  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Distinct functions of TMC channels: a comparative overview.Cellular and molecular life sciences : CMLS · 2019
    Review
  18. Article
  19. Beyond Cell-Cell Adhesion: Sensational Cadherins for Hearing and Balance.Cold Spring Harbor perspectives in biology · 2018
    Review
  20. Mutation spectra and founder effect of TMC1 in patients with non-syndromic deafness in Xiamen area, China.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Aparna GanapathyMolecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Bangalore, India.
Nishtha PandeyMolecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Bangalore, India.
C R Srikumari SrisailapathyDepartment of Genetics, Dr. ALM Post Graduate Institute of Basic Medical Sciences, Chennai, India.
Rajeev JalviDepartment of Audiology, Ali Yavar Jung National Institute for the Hearing Handicapped, Mumbai, India.
Vikas MalhotraDepartment of ENT, Maulana Azad Medical College, New Delhi, India.
Mohan VenkatappaMolecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Bangalore, India.
Arunima ChatterjeeMolecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Bangalore, India.
Meenakshi SharmaMolecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Bangalore, India.
Rekha SanthanamMolecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Bangalore, India.
Shelly ChadhaDepartment of ENT, Maulana Azad Medical College, New Delhi, India.
Arabandi RameshDepartment of Genetics, Dr. ALM Post Graduate Institute of Basic Medical Sciences, Chennai, India.
Arun K AgarwalDepartment of ENT, Maulana Azad Medical College, New Delhi, India.
Raghunath R RangasayeeDepartment of Audiology, Ali Yavar Jung National Institute for the Hearing Handicapped, Mumbai, India.
Anuranjan AnandMolecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Bangalore, India.
Jawaharlal Nehru Centre for Advanced Scientific Research · INMaulana Azad Medical College · INAli Yavar Jung National Institute for the Hearing Handicapped · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations in the autosomal genes TMPRSS3, TMC1, USHIC, CDH23 and TMIE are known to cause hereditary hearing loss. To study the contribution of these genes to autosomal recessive, non-syndromic hearing loss (ARNSHL) in India, we examined 374 families with the disorder to identify potential mutations. We found four mutations in TMPRSS3, eight in TMC1, ten in USHIC, eight in CDH23 and three in TMIE. Of the 33 potentially pathogenic variants identified in these genes, 23 were new and the remaining have been previously reported. Collectively, mutations in these five genes contribute to about one-tenth of ARNSHL among the families examined. New mutations detected in this study extend the allelic heterogeneity of the genes and provide several additional variants for structure-function correlation studies. These findings have implications for early DNA-based detection of deafness and genetic counseling of affected families in the Indian subcontinent.

Indexed as

AllelesMutationAdaptor Proteins, Signal TransducingAnimalsBase SequenceCadherin Related ProteinsCadherinsCell Cycle ProteinsCytoskeletal ProteinsExonsFemaleHearing LossHeterozygoteHomozygoteHumansIndiaAdaptor Proteins, Signal TransducingCadherin Related ProteinsCadherinsCDH23 protein, humanCell Cycle ProteinsCytoskeletal ProteinsMembrane ProteinsNeoplasm ProteinsSerine EndopeptidasesTMC1 protein, humanTMIE protein, humanTMPRSS3 protein, humanUSH1C protein, human

Identifiers

PMID24416283
PMCPMC3885616
OpenAlexW2067076099

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.