Evidence map›Paper›PMID 24416243›Full record

ArticlePloS one2014

Characterization and molecular profiling of PSEN1 familial Alzheimer's disease iPSC-derived neural progenitors.

Andrew A Sproul, Samson Jacob, Deborah Pre, Soong Ho Kim, Michael W Nestor, Miriam Navarro-Sobrino, Ismael Santa-Maria, Matthew Zimmer, Soline Aubry, John W Steele and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 113 papers.

0numbers the graph read from it
0cells of the map it votes in
113citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

113 citing papers in PubMed, 185 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
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  7. Experimental Cell Models for Investigating Neurodegenerative Diseases.International journal of molecular sciences · 2024
    Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Distinctive In Vitro Phenotypes in iPSC-Derived Neurons From Patients With Gain- and Loss-of-FunctionThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  13. Review
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  15. Article
  16. Article
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  18. Article
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  20. Review

53 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Andrew A SproulThe New York Stem Cell Foundation, New York, New York, United States of America.
Samson JacobThe New York Stem Cell Foundation, New York, New York, United States of America.
Deborah PreDepartment of Pathology & Cell Biology and the Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, United States of America.
Soong Ho KimDepartments of Neurology and Psychiatry and the Alzheimer's Disease Research Center, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Michael W NestorThe New York Stem Cell Foundation, New York, New York, United States of America.
Miriam Navarro-SobrinoDepartment of Psychiatry, Columbia University, New York, New York, United States of America.
Ismael Santa-MariaDepartment of Pathology & Cell Biology and the Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, United States of America.
Matthew ZimmerThe New York Stem Cell Foundation, New York, New York, United States of America.
Soline AubryDepartment of Pathology & Cell Biology and the Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, United States of America.
John W SteeleDepartments of Neurology and Psychiatry and the Alzheimer's Disease Research Center, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America.
David J KahlerThe New York Stem Cell Foundation, New York, New York, United States of America.
Alex DranovskyDepartment of Psychiatry, Columbia University, New York, New York, United States of America.
Ottavio ArancioDepartment of Pathology & Cell Biology and the Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, United States of America.
John F CraryDepartment of Pathology & Cell Biology and the Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, New York, United States of America.
Sam GandyDepartments of Neurology and Psychiatry and the Alzheimer's Disease Research Center, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America ; James J Peters Veterans Administration Medical Center, Bronx, New York, United States of America.
Scott A NoggleThe New York Stem Cell Foundation, New York, New York, United States of America.
Columbia University · USNew York Stem Cell Foundation · USIcahn School of Medicine at Mount Sinai · US

Funding

Satellite Diagnostic and Treatment Clinic CoreP50AG008702 · NIA · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI DE JAGER, PHILIP L · 1989 to 2019
$46.3M
VESICULAR LOCALIZATION AND FUNCTION OF PRESENILIN 1 FRAGMENTP50AG005138 · NIA · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI SEWELL, MARGARET · 1985 to 2019
$37.9M
Integrative Network Biology Approaches to Identify, Characterize and Validate Molecular Subtypes in Alzheimer's DiseaseU01AG046170 · NIA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI WANG, MINGHUI, ZHANG, BIN · 2013 to 2022
$26.0M
UCSD/SDSU IRACDAK12GM068524 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TREJO, JOANN · 2003 to 2025
$24.4M
VASCULAR FACTORS AND MILD COGNITIVE IMPAIRMENT AND ALZHEIMER'S DISEASEP01AG007232 · NIA · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI MAYEUX, RICHARD P · 1989 to 2008
$21.7M
Epidemiology of Biomarkers of Risk and Progression in LOADR01AG037212 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MAYEUX, RICHARD P, SCHUPF, NICOLE · 2010 to 2015
$10.1M
SUMOylation and Amyloid-beta elevationR01NS049442 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ARANCIO, OTTAVIO · 2005 to 2015
$4.1M
Mechanisms and Significance of Stem Cell Fate Plasticity in the Adult HippocampusR01MH091844 · NIMH · NEW YORK STATE PSYCHIATRIC INSTITUTE DBA RESEARCH FOUNDATION FOR MENTAL HYGIENE, INC · PI DRANOVSKY, ALEX · 2010 to 2014
$2.0M
Generation and Characterization of Alzheimer Brain CellsRF1AG042965 · NIA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI GANDY, SAMUEL E., NOGGLE, SCOTT ALLEN · 2012 to 2012
$516k
NIA NIH HHS 1U01AG046170-01NIA NIH HHS P01 AG007232NIA NIH HHS P01AG07232NIA NIH HHS P50 AG005138NIA NIH HHS P50 AG008702NIA NIH HHS P50AG08702NIA NIH HHS R01 AG037212NIA NIH HHS R01AG037212NIA NIH HHS R21AG042965NIA NIH HHS RF1 AG042965NIA NIH HHS U01 AG046170NIGMS NIH HHS K12 GM068524NIMH NIH HHS R01 MH091844NIMH NIH HHS R01MH091844NINDS NIH HHS NS049442NINDS NIH HHS R01 NS049442
6 · The paper itself

Abstract

Presenilin 1 (PSEN1) encodes the catalytic subunit of γ-secretase, and PSEN1 mutations are the most common cause of early onset familial Alzheimer's disease (FAD). In order to elucidate pathways downstream of PSEN1, we characterized neural progenitor cells (NPCs) derived from FAD mutant PSEN1 subjects. Thus, we generated induced pluripotent stem cells (iPSCs) from affected and unaffected individuals from two families carrying PSEN1 mutations. PSEN1 mutant fibroblasts, and NPCs produced greater ratios of Aβ42 to Aβ40 relative to their control counterparts, with the elevated ratio even more apparent in PSEN1 NPCs than in fibroblasts. Molecular profiling identified 14 genes differentially-regulated in PSEN1 NPCs relative to control NPCs. Five of these targets showed differential expression in late onset AD/Intermediate AD pathology brains. Therefore, in our PSEN1 iPSC model, we have reconstituted an essential feature in the molecular pathogenesis of FAD, increased generation of Aβ42/40, and have characterized novel expression changes.

Indexed as

Adaptor Proteins, Signal TransducingAlzheimer DiseaseAmyloid beta-PeptidesAnimalsApolipoproteins EApoptosis Regulatory ProteinsBase SequenceBrainCell DifferentiationCell LineEye ProteinsGene Expression ProfilingGene Expression RegulationGenotypeHumansInduced Pluripotent Stem CellsAdaptor Proteins, Signal TransducingAmyloid beta-Peptidesamyloid beta-protein (1-40)amyloid beta-protein (1-42)Apolipoproteins EApoptosis Regulatory ProteinsASB9 protein, humanEye ProteinsNDP protein, humanNerve Tissue ProteinsNLRP2 protein, humanPeptide FragmentsPresenilin-1Suppressor of Cytokine Signaling Proteins

Identifiers

PMID24416243
PMCPMC3885572
OpenAlexW2073252618

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.