Evidence map›Paper›PMID 24416236›Full record

ArticlePloS one2014

Trps1 differentially modulates the bone mineral density between male and female mice and its polymorphism associates with BMD differently between women and men.

Lishi Wang, Wenli Lu, Lei Zhang, Yue Huang, Rachel Scheib, Xiaoyun Liu, Linda Myers, Lu Lu, Charles R Farber, Gaifen Liu and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

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  11. Genetics of aging bone.Mammalian genome : official journal of the International Mammalian Genome Society · 2016
    Review
  12. Novel Genetic Loci Control Calcium Absorption and Femur Bone Mass as Well as Their Response to Low Calcium Intake in Male BXD Recombinant Inbred Mice.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 2 countries.

Lishi WangDepartment of Orthopedic Surgery and BioMedical Engineering, Campbell-Clinic, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America ; Department of Basic Medicine, Inner Mongolia Medical University, Huhhot, Inner Mongolia, P.R. China.
Wenli LuDepartment of Orthopedic Surgery and BioMedical Engineering, Campbell-Clinic, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America.
Lei ZhangDepartment of Biostatistics and Bioinformatics, School of Public Health and Tropical Medicine, Tulane University, New Orleans, Louisiana, United States of America.
Yue HuangDepartment of Orthopedic Surgery and BioMedical Engineering, Campbell-Clinic, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America.
Rachel ScheibDepartment of Orthopedic Surgery and BioMedical Engineering, Campbell-Clinic, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America.
Xiaoyun LiuDepartment of Orthopedic Surgery and BioMedical Engineering, Campbell-Clinic, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America.
Linda MyersDepartment of Medicine, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America.
Lu LuDepartment of Anatomy and Neurobiology, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America.
Charles R FarberCenter for Public Health Genomics, Departments of Medicine (Division of Cardiology) and Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, Virginia, United States of America.
Gaifen LiuDepartment of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
Cong-Yi WangThe Center for Biomedical Research, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, HuBei, China.
Hongwen DengDepartment of Biostatistics and Bioinformatics, School of Public Health and Tropical Medicine, Tulane University, New Orleans, Louisiana, United States of America.
Robert W WilliamsDepartment of Anatomy and Neurobiology, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America.
Yongjun WangDepartment of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing, China.
Weikuan GuDepartment of Orthopedic Surgery and BioMedical Engineering, Campbell-Clinic, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America.
Yan JiaoDepartment of Orthopedic Surgery and BioMedical Engineering, Campbell-Clinic, University of Tennessee Health Science Center, Memphis, Tennessee, United States of America.
University of Tennessee Health Science Center · USCampbell Clinic · USCapital Medical University · CNTulane University · USInner Mongolia Medical University · CNTongji Hospital · CNUniversity of Virginia · US

Funding

GENETICS OF BONE LOSS AND BONE STRENGTH IN WOMEN &MENP01AG018397 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI ECONS, MICHAEL J · 2000 to 2010
$19.1M
RISK FACTORS FOR VERTEBRAL FRACTURE AND BONE LOSSR01AR041398 · NIAMS · RHODE ISLAND HOSPITAL (PROVIDENCE, RI) · PI KIEL, DOUGLAS P. · 1991 to 2025
$16.1M
Proteome-wide Expression Study of Osteogenic CellsP50AR055081 · NIAMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2007 to 2012
$5.0M
ROBUST AND POWERFUL TEST OF CANDIDATE GENES TO BONE MASSR01AR050496 · NIAMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2004 to 2013
$3.8M
INIA-STRESS: Informatics and Analysis CoreU01AA016662 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI WILLIAMS, ROBERT W. · 2007 to 2016
$2.9M
Identification of Proteins Important for Male OsteoporosisR01AR057049 · NIAMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2009 to 2013
$2.4M
GENETICS OF BONE STRUCTURAL GEOMETRY: FRAMINGHAM COHORTSR01AR050066 · NIAMS · HEBREW REHABILITATION CENTER FOR AGED · PI KARASIK, DAVID · 2003 to 2006
$2.4M
Genomic search for bone mass QTLsR01AG026564 · NIA · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN · 2007 to 2010
$2.3M
20(OH) Vit D3, T Cells, and ArthritisR01AR064825 · NIAMS · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI KANG, ANDREW H · 2014 to 2018
$1.6M
MUTATION SCREENING OF SKELETAL DISEASE MOUSE MODELSR01AR051190 · NIAMS · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI GU, WEIKUAN · 2004 to 2007
$1.1M
SLEEP AND ENTRAINMENT OF SCN FUNCTIONR01HL064278 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI STROHL, KINGMAN PERKINS · 1999 to 2002
$871k
Genome-wide association study of periodontitisRC2DE020756 · NIDCR · UNIVERSITY OF MISSOURI KANSAS CITY · PI DENG, HONG-WEN, GENCO, ROBERT J · 2009 to 2009
$173k
FIC NIH HHS R03 TW008221FIC NIH HHS R03TW008221NHLBI NIH HHS N01 HC025195NHLBI NIH HHS N01-HC-25195NHLBI NIH HHS N02 HL064278NHLBI NIH HHS N02-HL-64278NIAAA NIH HHS U01 AA016662NIAMS NIH HHS P50 AR055081NIAMS NIH HHS P50AR055081NIAMS NIH HHS R01 AR041398NIAMS NIH HHS R01 AR050066NIAMS NIH HHS R01 AR050496NIAMS NIH HHS R01AR050496NIAMS NIH HHS R01 AR051190NIAMS NIH HHS R01 AR057049NIAMS NIH HHS R01AR057049NIAMS NIH HHS R01 AR064825NIAMS NIH HHS R01 AR51190NIA NIH HHS P01 AG018397NIA NIH HHS P01-AG018397NIA NIH HHS R01 AG026564NIA NIH HHS R01AG026564NIA NIH HHS R01 AR/AG 41398NIA NIH HHS R03 AG20321NIDCR NIH HHS RC2 DE020756NIDCR NIH HHS RC2DE020756
6 · The paper itself

Abstract

The objective of our study was to identify genetic factors that regulate bone mineral density (BMD) in mice using well defined recombinant inbred strains. For this purpose we chose the BXD recombinant inbred (RI) strains derived from progeny of the C57BL/6J (B6) and DBA/2J (D2) progenitor strains. We sampled both male and female mice (∼4 each) of 46 strains at 3 months-of-age, measured their BMD, and conducted QTL mapping. The data were analyzed to identify candidates genes contained within the most significant quantitative trait locus (QTL). Evaluation of candidate genes included functional assessment, single nucleotide polymorphism (SNP) genotyping and direct sequencing. We established that there was a QTL for BMD in males on chromosome 15 that has the impact larger than QTLs on all other chromosomes. The QTL on chromosome 15 was narrowed to a genomic region between 38 Mbp and 52 Mbp. By examining transcripts within this region, we found an important candidate gene: trichorhinophalangeal syndrome, type I (Trps1). SNP analysis identified a nonsynonymous SNP (rs32398060) in Trps1 that co-segregated with bone mineral density. Analysis of association between this SNP within TRPS1 and BMD in a human population confirmed its significance.

Indexed as

Polymorphism, Single NucleotideSex CharacteristicsAnimalsBone DensityChromosomes, Human, Pair 15DNA-Binding ProteinsFemaleGATA Transcription FactorsHumansInbreedingMaleMiceQuantitative Trait LociRepressor ProteinsTranscription FactorsDNA-Binding ProteinsGATA Transcription FactorsRepressor ProteinsTranscription FactorsTRPS1 protein, humanTrps1 protein, mouse

Identifiers

PMID24416236
PMCPMC3885592
OpenAlexW2057389200

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.