Evidence map›Paper›PMID 24413055›Full record

ArticleNature structural & molecular biology2014

Structural basis of lipid-driven conformational transitions in the KvAP voltage-sensing domain.

Qufei Li, Sherry Wanderling, Pornthep Sompornpisut, Eduardo Perozo

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Review
  2. Review
  3. The S1 helix is a VIP in VSP.The Journal of general physiology · 2024
    Article
  4. Article
  5. Vascular mechanotransduction.Physiological reviews · 2023
    Review
  6. Article
  7. Article
  8. Mechanism of voltage sensing in CaProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Article
  10. Article
  11. High-Resolution Structures of KHandbook of experimental pharmacology · 2021
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Qufei LiDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, Illinois, USA.
Sherry WanderlingDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, Illinois, USA.
Pornthep SompornpisutDepartment of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, Thailand.
Eduardo PerozoDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, Illinois, USA.

Funding

Synthetic Antigen Binder CoreU54GM087519 · NIGMS · UNIVERSITY OF CHICAGO · PI NAKAMOTO, ROBERT K. · 2010 to 2017
$31.9M
Subproject 5U54GM074946 · NIGMS · UNIVERSITY OF CALIF-LOS ALAMOS NAT LAB · PI TERWILLIGER, THOMAS C. · 2005 to 2009
$20.2M
HIGH RESOLUTION STRUCTURAL DYNAMICS OF K CHANNELSR01GM057846 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI PEROZO, EDUARDO A · 1998 to 2018
$7.4M
NIGMS NIH HHS R01 GM057846NIGMS NIH HHS R01-GM57846NIGMS NIH HHS U54 GM074946NIGMS NIH HHS U54 GM087519NIGMS NIH HHS U54-GM74946
6 · The paper itself

Abstract

Voltage-gated ion channels respond to transmembrane electric fields through reorientations of the positively charged S4 helix within the voltage-sensing domain (VSD). Despite a wealth of structural and functional data, the details of this conformational change remain controversial. Recent electrophysiological evidence showed that equilibrium between the resting ('down') and activated ('up') conformations of the KvAP VSD from Aeropyrum pernix can be biased through reconstitution in lipids with or without phosphate groups. We investigated the structural transition between these functional states, using site-directed spin-labeling and EPR spectroscopic methods. Solvent accessibility and interhelical distance determinations suggest that KvAP gates through S4 movements involving an ∼3-Å upward tilt and simultaneous ∼2-Å axial shift. This motion leads to large accessibly changes in the intracellular water-filled crevice and supports a new model of gating that combines structural rearrangements and electric-field remodeling.

Indexed as

AeropyrumLipid MetabolismLipidsMolecular ConformationPotassium Channels, Voltage-GatedSpin LabelsLipidsPotassium Channels, Voltage-GatedSpin Labels

Identifiers

PMID24413055
PMCPMC3946318

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.