Evidence map›Paper›PMID 24412362›Full record

ArticleCell reports2014

Arabidopsis accelerated cell death 11, ACD11, is a ceramide-1-phosphate transfer protein and intermediary regulator of phytoceramide levels.

Dhirendra K Simanshu, Xiuhong Zhai, David Munch, Daniel Hofius, Jennifer E Markham, Jacek Bielawski, Alicja Bielawska, Lucy Malinina, Julian G Molotkovsky, John W Mundy and 2 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
  2. Article
  3. AmBio · 2025
    Article
  4. Article
  5. Article
  6. TheHorticulture research · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Lipidomic Remodeling inFrontiers in plant science · 2022
    Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 4 countries.

Dhirendra K SimanshuStructural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.
Xiuhong ZhaiHormel Institute, University of Minnesota, Austin, MN 55912, USA.
David MunchDepartment of Biology, BioCenter, University of Copenhagen, 2200 Copenhagen N, Denmark.
Daniel HofiusDepartment of Biology, BioCenter, University of Copenhagen, 2200 Copenhagen N, Denmark.
Jennifer E MarkhamDepartment of Biochemistry, University of Nebraska, N146 Beadle Center, Lincoln, NE 68588, USA.
Jacek BielawskiDepartment of Biochemistry and Molecular Biology, Lipidomics Shared Resource Mass Spectrometry Lab, Medical University of South Carolina, Charleston, SC 29425, USA.
Alicja BielawskaDepartment of Biochemistry and Molecular Biology, Lipidomics Shared Resource Mass Spectrometry Lab, Medical University of South Carolina, Charleston, SC 29425, USA.
Lucy MalininaStructural Biology Unit, CIC bioGUNE, Technology Park of Bizkaia, 48160 Derio-Bilbao, Spain.
Julian G MolotkovskyShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia.
John W MundyDepartment of Biology, BioCenter, University of Copenhagen, 2200 Copenhagen N, Denmark. Electronic address: mundy@science.ku.dk.
Dinshaw J PatelStructural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA. Electronic address: pateld@mskcc.org.
Rhoderick E BrownHormel Institute, University of Minnesota, Austin, MN 55912, USA. Electronic address: reb@umn.edu.
University of Copenhagen · DKHormel (United States) · USMedical University of South Carolina · USMemorial Sloan Kettering Cancer Center · USCIC bioGUNE · ESInstitute of Bioorganic Chemistry · RUUniversity of Nebraska–Lincoln · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Translational Science Laboratory Shared ResourceP30CA138313 · NCI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI RAYMOND N. DUBOIS · 2009 to 2026
$42.7M
THE ROLE OF LACTOSYLCERAMIDE IN RENAL AGING AND DISEASEP20RR017677 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI SISKIND, LEAH J · 2002 to 2011
$23.4M
Life Science and Biomedical technology Research center at NSLS-II LSBRP41GM111244 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI MCSWEENEY, SEAN · 2014 to 2018
$16.4M
GLYCOLIPID TRANSFER--REGULATION BY MEMBRANE INTERFACESR01GM045928 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI BROWN, RHODERICK E · 1992 to 2014
$4.8M
EXTRAMURAL RESEARCH FACILITIES CONSTRUCTIONC06RR018823 · NCRR · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI RAYMOND, JOHN R · 2003 to 2003
$2.9M
MOLECULAR BASIS OF GLYCOSPHINGOLIPID BINDING SPECIFICITYR01CA121493 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI PATEL, DINSHAW J · 2006 to 2010
$1.2M
NCI NIH HHS CA121493NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA138313NCI NIH HHS R01 CA121493NCRR NIH HHS C06 RR018823NCRR NIH HHS P20 RR017677NIGMS NIH HHS GM45928NIGMS NIH HHS P41 GM111244NIGMS NIH HHS R01 GM045928
6 · The paper itself

Abstract

The accelerated cell death 11 (acd11) mutant of Arabidopsis provides a genetic model for studying immune response activation and localized cellular suicide that halt pathogen spread during infection in plants. Here, we elucidate ACD11 structure and function and show that acd11 disruption dramatically alters the in vivo balance of sphingolipid mediators that regulate eukaryotic-programmed cell death. In acd11 mutants, normally low ceramide-1-phosphate (C1P) levels become elevated, but the relatively abundant cell death inducer phytoceramide rises acutely. ACD11 exhibits selective intermembrane transfer of C1P and phyto-C1P. Crystal structures establish C1P binding via a surface-localized, phosphate headgroup recognition center connected to an interior hydrophobic pocket that adaptively ensheaths lipid chains via a cleft-like gating mechanism. Point mutation mapping confirms functional involvement of binding site residues. A π helix (π bulge) near the lipid binding cleft distinguishes apo-ACD11 from other GLTP folds. The global two-layer, α-helically dominated, "sandwich" topology displaying C1P-selective binding identifies ACD11 as the plant prototype of a GLTP fold subfamily.

Indexed as

Amino Acid SequenceApoptosis Regulatory ProteinsArabidopsisArabidopsis ProteinsBinding SitesCeramidesMembrane Transport ProteinsMolecular Sequence DataMutationProtein BindingACD11 protein, ArabidopsisApoptosis Regulatory ProteinsArabidopsis Proteinsceramide 1-phosphateCeramidesMembrane Transport Proteins

Identifiers

PMID24412362
PMCPMC3931444
OpenAlexW2098884533

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.