Evidence map›Paper›PMID 24412312›Full record

ArticleCell stem cell2014

Genetic exploration of the exit from self-renewal using haploid embryonic stem cells.

Martin Leeb, Sabine Dietmann, Maike Paramor, Hitoshi Niwa, Austin Smith

Open access · hybridAbstract read
In one paragraph

Article in Cell stem cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 129 papers.

0numbers the graph read from it
0cells of the map it votes in
129citing papers in PubMed
10.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

129 citing papers in PubMed, 214 citations in OpenAlex.

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  12. Propagating pluripotency - The conundrum of self-renewal.BioEssays : news and reviews in molecular, cellular and developmental biology · 2024
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69 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Martin LeebWellcome Trust - Medical Research Council Stem Cell Institute, University of Cambridge, Tennis Court Road, CB2 1QR, Cambridge, UK. Electronic address: ml553@cam.ac.uk.
Sabine DietmannWellcome Trust - Medical Research Council Stem Cell Institute, University of Cambridge, Tennis Court Road, CB2 1QR, Cambridge, UK.
Maike ParamorWellcome Trust - Medical Research Council Stem Cell Institute, University of Cambridge, Tennis Court Road, CB2 1QR, Cambridge, UK.
Hitoshi NiwaRIKEN Center for Developmental Biology, 650-0047 Kobe, Japan.
Austin SmithWellcome Trust - Medical Research Council Stem Cell Institute, University of Cambridge, Tennis Court Road, CB2 1QR, Cambridge, UK; Department of Biochemistry, University of Cambridge, Tennis Court Road, CB2 1GA, Cambridge, UK. Electronic address: austin.smith@cscr.cam.ac.uk.
Medical Research Council · GBRIKEN Center for Computational Science · JPUniversity of Cambridge · GBWellcome/MRC Cambridge Stem Cell Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H531527/1Medical Research Council G1001028Medical Research Council G1100526Medical Research Council MC_PC_12009Wellcome Trust
6 · The paper itself

Abstract

Self-renewal circuitry in embryonic stem cells (ESCs) is increasingly defined. How the robust pluripotency program is dissolved to enable fate transition is less appreciated. Here we develop a forward genetic approach using haploid ESCs. We created libraries of transposon integrations and screened for persistent self-renewal in differentiation-permissive culture. This yielded multiple mutants in the Fgf/Erk and GSK3/Tcf3 modules known to drive differentiation and in epigenetic modifiers implicated in lineage commitment. We also identified and validated factors not previously considered. These include the conserved small zinc finger protein Zfp706 and the RNA binding protein Pum1. Pum1 targets several mRNAs for naive pluripotency transcription factors and accelerates their downregulation at the onset of differentiation. These findings indicate that the dismantling of pluripotent circuitry proceeds at multiple levels. More broadly they exemplify the power of haploid ESCs for genetic interrogation of developmental processes.

Indexed as

Genetic TechniquesHaploidyAnimalsCell DifferentiationCell LineCell ProliferationDown-RegulationEmbryonic Stem CellsGenes, ReporterGreen Fluorescent ProteinsHumansModels, BiologicalMutationPluripotent Stem CellsRNA-Binding ProteinsRNA, MessengerGreen Fluorescent ProteinsRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID24412312
PMCPMC3995090
OpenAlexW2149236471

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.