ArticleFrontiers in plant science2013
Genome scale transcriptional response diversity among ten ecotypes of Arabidopsis thaliana during heat stress.
Article in Frontiers in plant science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed.
- Natural variation uncouples HSFA2 induction from volatile-induced thermotolerance in Arabidopsis thaliana.Plant molecular biology · 2026Article
- Reclassification of Botryococcus braunii chemical races into separate species based on a comparative genomics analysis.PloS one · 2024Article
- CsBZIP40 confers resistance against citrus bacterial canker by repressing CsWRKY43-CsPrx53/CsSOD13 cascade mediated ROS scavenging.Horticulture research · 2023Article
- Assessing the Impact of a Viral Infection on the Expression of Transposable Elements in the Cabbage Looper Moth (Trichoplusia ni).Genome biology and evolution · 2021Article
- Genomic Approaches for Conservation Management in Australia under Climate Change.Life (Basel, Switzerland) · 2021Review
- Mitochondria-Targeted SmsHSP24.1 Overexpression Stimulates Early Seedling Vigor and Stress Tolerance by Multi-Pathway Transcriptome-Reprogramming.Frontiers in plant science · 2021Article
- The Transcription Factor bZIP60 Links the Unfolded Protein Response to the Heat Stress Response in Maize.The Plant cell · 2020Article
- Genome-Wide Analysis, Characterization, and Expression Profile of the Basic Leucine Zipper Transcription Factor Family in Pineapple.International journal of genomics · 2020Article
- Elevated Temperatures Impose Transcriptional Constraints and Elicit Intraspecific Differences Between Coffee Genotypes.Frontiers in plant science · 2020Article
- Male Sterility in Maize after Transient Heat Stress during the Tetrad Stage of Pollen Development.Plant physiology · 2019Article
- Many Facets of Dynamic Plasticity in Plants.Cold Spring Harbor perspectives in biology · 2019Review
- Article
- Tissue-Specific Transcriptomics Reveals an Important Role of the Unfolded Protein Response in Maintaining Fertility upon Heat Stress in Arabidopsis.The Plant cell · 2017Article
- Transcriptional regulatory networks in Arabidopsis thaliana during single and combined stresses.Nucleic acids research · 2016Article
- Habitat Temperature and Precipitation of Arabidopsis thaliana Ecotypes Determine the Response of Foliar Vasculature, Photosynthesis, and Transpiration to Growth Temperature.Frontiers in plant science · 2016Article
- Soybean Roots Grown under Heat Stress Show Global Changes in Their Transcriptional and Proteomic Profiles.Frontiers in plant science · 2016Article
- Reconstruction of temporal activity of microRNAs from gene expression data in breast cancer cell line.BMC genomics · 2015Article
- G-protein Signaling Components GCR1 and GPA1 Mediate Responses to Multiple Abiotic Stresses in Arabidopsis.Frontiers in plant science · 2015Article
- Natural variations in expression of regulatory and detoxification related genes under limiting phosphate and arsenate stress in Arabidopsis thaliana.Frontiers in plant science · 2015Article
- Circadian regulation of abiotic stress tolerance in plants.Frontiers in plant science · 2015Review
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4 authors.
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No grant is acknowledged in the PubMed record.
Abstract
In the scenario of global warming and climate change, heat stress is a serious threat to crop production worldwide. Being sessile, plants cannot escape from heat. Plants have developed various adaptive mechanisms to survive heat stress. Several studies have focused on diversity of heat tolerance levels in divergent Arabidopsis thaliana (A. thaliana) ecotypes, but comprehensive genome scale understanding of heat stress response in plants is still lacking. Here we report the genome scale transcript responses to heat stress of 10 A. thaliana ecotypes (Col, Ler, C24, Cvi, Kas1, An1, Sha, Kyo2, Eri, and Kond) originated from different geographical locations. During the experiment, A. thaliana plants were subjected to heat stress (38°C) and transcript responses were monitored using Arabidopsis NimbleGen ATH6 microarrays. The responses of A. thaliana ecotypes exhibited considerable variation in the transcript abundance levels. In total, 3644 transcripts were significantly heat regulated (p < 0.01) in the 10 ecotypes, including 244 transcription factors and 203 transposable elements. By employing a systems genetics approach- Network Component Analysis (NCA), we have constructed an in silico transcript regulatory network model for 35 heat responsive transcription factors during cellular responses to heat stress in A. thaliana. The computed activities of the 35 transcription factors showed ecotype specific responses to the heat treatment.
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