Evidence map›Paper›PMID 24409174›Full record

ArticleFrontiers in microbiology2014

Oxalotrophy, a widespread trait of plant-associated Burkholderia species, is involved in successful root colonization of lupin and maize by Burkholderia phytofirmans.

Thomas Kost, Nejc Stopnisek, Kirsty Agnoli, Leo Eberl, Laure Weisskopf

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

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  14. Increase in Cd Tolerance through Seed-Borne Endophytic FungusInternational journal of molecular sciences · 2022
    Article
  15. Review
  16. Induction of Diverse Cryptic Fungal Metabolites by Steroids and Channel Blockers.Angewandte Chemie (International ed. in English) · 2022
    Article
  17. Review
  18. Identification of a small set of genes commonly regulated in rice roots in response to beneficial rhizobacteria.Physiology and molecular biology of plants : an international journal of functional plant biology · 2020
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Thomas KostLaboratory of Microbiology, Institute of Plant Biology, University of Zurich Zurich, Switzerland.
Nejc StopnisekLaboratory of Microbiology, Institute of Plant Biology, University of Zurich Zurich, Switzerland ; Ecology of Noxious and Beneficial Organisms, Institute of Sustainability Sciences Agroscope, Zurich, Switzerland.
Kirsty AgnoliLaboratory of Microbiology, Institute of Plant Biology, University of Zurich Zurich, Switzerland.
Leo EberlLaboratory of Microbiology, Institute of Plant Biology, University of Zurich Zurich, Switzerland.
Laure WeisskopfLaboratory of Microbiology, Institute of Plant Biology, University of Zurich Zurich, Switzerland ; Ecology of Noxious and Beneficial Organisms, Institute of Sustainability Sciences Agroscope, Zurich, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant roots and shoots harbor complex bacterial communities. Early seed and plantlet colonization plays a key role in determining which bacterial populations will successfully invade plant tissues, yet the mechanisms enabling plants to select for beneficial rather than harmful populations are largely unknown. In this study, we demonstrate a role of oxalate as a determinant in this selection process, using members of the genus Burkholderia as model organisms. Oxalotrophy, i.e., the ability to use oxalate as a carbon source, was found to be a property strictly associated with plant-beneficial species of the Burkholderia genus, while plant pathogenic (B. glumae, B. plantarii) or human opportunistic pathogens (Burkholderia cepacia complex strains) were unable to degrade oxalate. We further show that oxalotrophy is required for successful plant colonization by the broad host endophyte Burkholderia phytofirmans PsJN: an engineered Δoxc mutant, which lost the ability to grow on oxalate, was significantly impaired in early colonization of both lupin and maize compared with the wild-type. This work suggests that in addition to the role of oxalate in heavy metal tolerance of plants and in virulence of phytopathogenic fungi, it is also involved in specifically recruiting plant-beneficial members from complex bacterial communities.

Indexed as

Burkholderiaoxalateoxalate decarboxylasePGPRroot colonization

Identifiers

PMID24409174
PMCPMC3886118

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.