Evidence map›Paper›PMID 24408378›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2014

Genome-wide association mapping of yield and yield components of spring wheat under contrasting moisture regimes.

Erena A Edae, Patrick F Byrne, Scott D Haley, Marta S Lopes, Matthew P Reynolds

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 130 papers.

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130citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

130 citing papers in PubMed.

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70 more citing papers are in PubMed but not listed here.

4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Erena A EdaeDepartment of Soil and Crop Sciences, Colorado State University, Fort Collins, CO, 80523, USA, erenakae@yahoo.com.
Patrick F Byrne
Scott D Haley
Marta S Lopes
Matthew P Reynolds

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageA stable QTL that may be used in marker-assisted selection in wheat breeding programs was detected for yield, yield components and drought tolerance-related traits in spring wheat association mapping panel. Genome-wide association mapping has become a widespread method of quantitative trait locus (QTL) identification for many crop plants including wheat (Triticum aestivum L.). Its benefit over traditional bi-parental mapping approaches depends on the extent of linkage disequilibrium in the mapping population. The objectives of this study were to determine linkage disequilibrium decay rate and population structure in a spring wheat association mapping panel (n = 285-294) and to identify markers associated with yield and yield components, morphological, phenological, and drought tolerance-related traits. The study was conducted under fully irrigated and rain-fed conditions at Greeley, CO, USA and Melkassa, Ethiopia in 2010 and 2011 (five total environments). Genotypic data were generated using diversity array technology markers. Linkage disequilibrium decay rate extended over a longer genetic distance for the D genome (6.8 cM) than for the A and B genomes (1.7 and 2.0 cM, respectively). Seven subpopulations were identified with population structure analysis. A stable QTL was detected for grain yield on chromosome 2DS both under irrigated and rain-fed conditions. A multi-trait region significant for yield and yield components was found on chromosome 5B. Grain yield QTL on chromosome 1BS co-localized with harvest index QTL. Vegetation indices shared QTL with harvest index on chromosome 1AL and 5A. After validation in relevant genetic backgrounds and environments, QTL detected in this study for yield, yield components and drought tolerance-related traits may be used in marker-assisted selection in wheat breeding programs.

Indexed as

Genome-Wide Association StudyHumiditySeasonsChromosome MappingChromosomes, PlantGenetic MarkersGenome, PlantLinkage DisequilibriumModels, GeneticPhenotypePopulation DynamicsQuantitative Trait, HeritableRainTemperatureTriticumGenetic Markers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.