Evidence map›Paper›PMID 24408130›Full record

ArticleFunctional & integrative genomics2014

Quantitative resistance in potato leaves to late blight associated with induced hydroxycinnamic acid amides.

Kalenahalli N Yogendra, Doddaraju Pushpa, Kareem A Mosa, Ajjamada C Kushalappa, Agnes Murphy, Teresa Mosquera

Abstract read
PubMed Publisher
In one paragraph

Article in Functional & integrative genomics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
12.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Physiological, Chemical and Metabolite Profiling ofPlants (Basel, Switzerland) · 2025
    Article
  5. Article
  6. Transcriptome Dynamics Underlying PlanticineInternational journal of molecular sciences · 2023
    Article
  7. Article
  8. Suberin Biosynthesis, Assembly, and Regulation.Plants (Basel, Switzerland) · 2022
    Review
  9. Article
  10. Bioinspired Rhamnolipid Protects Wheat AgainstFrontiers in plant science · 2022
    Article
  11. Article
  12. Article
  13. Metabolic profiling for dissection of late leaf spot disease resistance mechanism in groundnut.Physiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Kalenahalli N YogendraPlant Science Department, McGill University, Ste.-Anne-de-Bellevue, Quebec, H9X 3V9, Canada.
Doddaraju Pushpa
Kareem A Mosa
Ajjamada C Kushalappa
Agnes Murphy
Teresa Mosquera
McGill University · CAAgriculture and Agri-Food Canada · CAUniversidad Nacional de Colombia · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Late blight is a serious economic threat to potato crop, sometimes leading to complete crop loss. The resistance in potato to late blight can be qualitative or quantitative in nature. Qualitative resistance is not durable. Though quantitative resistance is durable, the breeding is challenging due to polygenic inheritance. Several quantitative trait loci (QTLs) have been identified, but the mechanisms of resistance are largely unknown. A nontargeted metabolomics approach was used to identify resistance-related (RR) metabolites in a resistant genotype (F06025), as compared to a susceptible (Shepody) genotype, mock- or pathogen-inoculated. The RR metabolites, which had high fold change in abundance, mainly belonged to phenylpropanoid, flavonoid, fatty acid, and alkaloid chemical groups. The most important phenylpropanoids identified were hydroxycinnamic acid amides, the polyaromatic domain of suberin that is known to be associated with cell wall reinforcement. These metabolites were mapped on to the potato metabolic pathways, and the candidate enzymes and their coding genes were identified. A quantitative reverse transcription polymerase chain reaction (qRT-PCR) assay revealed a higher upregulation of 4-coumarate: CoA ligase (4-CL), tyrosine decarboxylase (TyDC), and tyramine hydroxycinnamoyl transferase (THT) in the pathogen-inoculated resistant genotype than in susceptible. These genes were sequenced in both resistant and susceptible genotypes, and nonsynonymous single-nucleotide polymorphisms (nsSNPs) were found. The application of these genes in potato resistance improvement, following validation, is discussed.

Indexed as

AcyltransferasesAmidesAmino Acid SequenceCoenzyme A LigasesCoumaric AcidsGene Expression Regulation, PlantGenotypeMetabolic Networks and PathwaysMolecular Sequence DataPhytophthora infestansPlant DiseasesPlant ImmunityPlant LeavesPlant ProteinsPolymorphism, Single NucleotideQuantitative Trait LociAcyltransferasesAmidesCoenzyme A LigasesCoumaric Acidshydroxycinnamoyl-CoA-tyramine N-(hydroxycinnamoyl)transferasePlant ProteinsTyrosine Decarboxylase

Identifiers

PMID24408130
OpenAlexW2033082218

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.