Evidence map›Paper›PMID 24406793›Full record

ArticlePlant physiology2014

A novel rice cytochrome P450 gene, CYP72A31, confers tolerance to acetolactate synthase-inhibiting herbicides in rice and Arabidopsis.

Hiroaki Saika, Junko Horita, Fumio Taguchi-Shiobara, Satoko Nonaka, Ayako Nishizawa-Yokoi, Satoshi Iwakami, Kiyosumi Hori, Takashi Matsumoto, Tsuyoshi Tanaka, Takeshi Itoh and 4 more

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
12.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 134 citations in OpenAlex.

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  12. Molecular Characterization of Resistance to Nicosulfuron inInternational journal of molecular sciences · 2023
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  19. Breeding rice for a changing climate by improving adaptations to water saving technologies.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Hiroaki SaikaAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Junko HoritaAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Fumio Taguchi-ShiobaraAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Satoko NonakaAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Ayako Nishizawa-YokoiAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Satoshi IwakamiAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Kiyosumi HoriAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Takashi MatsumotoAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Tsuyoshi TanakaAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Takeshi ItohAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Masahiro YanoAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Koichiro KakuAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Tsutomu ShimizuAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.).
Seiichi TokiAgrogenomics Research Center, National Institute of Agrobiological Sciences, Tsukuba, Ibaraki 305-8602, Japan (H.S., F.T.-S., A.N.-Y., K.H., T.M., T.T., T.I., M.Y., S.T.);Life Science Research Institute, Kumiai Chemical Industry, Kakegawa, Shizuoka 439-0031, Japan (J.H., K.K., T.S.);Graduate School of Life and Environmental Sciences, Gene Research Center, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan (S.N.);Graduate School of Agriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan (S.I.); andKihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan (S.T.) stoki@affrc.go.jp.
Institute of Agrobiological Sciences · JPKumiai Chemical Industry (Japan) · JPKyoto University · JPUniversity of Tsukuba · JPYokohama City University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Target-site and non-target-site herbicide tolerance are caused by the prevention of herbicide binding to the target enzyme and the reduction to a nonlethal dose of herbicide reaching the target enzyme, respectively. There is little information on the molecular mechanisms involved in non-target-site herbicide tolerance, although it poses the greater threat in the evolution of herbicide-resistant weeds and could potentially be useful for the production of herbicide-tolerant crops because it is often involved in tolerance to multiherbicides. Bispyribac sodium (BS) is an herbicide that inhibits the activity of acetolactate synthase. Rice (Oryza sativa) of the indica variety show BS tolerance, while japonica rice varieties are BS sensitive. Map-based cloning and complementation tests revealed that a novel cytochrome P450 monooxygenase, CYP72A31, is involved in BS tolerance. Interestingly, BS tolerance was correlated with CYP72A31 messenger RNA levels in transgenic plants of rice and Arabidopsis (Arabidopsis thaliana). Moreover, Arabidopsis overexpressing CYP72A31 showed tolerance to bensulfuron-methyl (BSM), which belongs to a different class of acetolactate synthase-inhibiting herbicides, suggesting that CYP72A31 can metabolize BS and BSM to a compound with reduced phytotoxicity. On the other hand, we showed that the cytochrome P450 monooxygenase CYP81A6, which has been reported to confer BSM tolerance, is barely involved, if at all, in BS tolerance, suggesting that the CYP72A31 enzyme has different herbicide specificities compared with CYP81A6. Thus, the CYP72A31 gene is a potentially useful genetic resource in the fields of weed control, herbicide development, and molecular breeding in a broad range of crop species.

Indexed as

Herbicide ResistanceAcetolactate SynthaseArabidopsisBase SequenceBenzoatesCrops, AgriculturalCytochrome P-450 Enzyme SystemHerbicidesMolecular Sequence DataOryzaPlant ProteinsPlant RootsPlants, Genetically ModifiedPlant ShootsPyrimidinesSequence Analysis, DNAAcetolactate SynthaseBenzoatesbispyribacCytochrome P-450 Enzyme SystemHerbicidesPlant ProteinsPyrimidines

Identifiers

PMID24406793
PMCPMC4226355
OpenAlexW2068990260

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.