Evidence map›Paper›PMID 24405787›Full record

ArticleBMC genomics2014

Differential transcriptional profile of Corynebacterium pseudotuberculosis in response to abiotic stresses.

Anne Cybelle Pinto, Pablo Henrique Caracciolo Gomes de Sá, Rommel T J Ramos, Silvanira Barbosa, Hivana P Melo Barbosa, Adriana Carneiro Ribeiro, Wanderson Marques Silva, Flávia Souza Rocha, Mariana Passos Santana, Thiago Luiz de Paula Castro and 4 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 56 citations in OpenAlex.

  1. Core Perturbomes ofPathogens (Basel, Switzerland) · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. First genome sequencing and comparative analyses ofStandards in genomic sciences · 2018
    Article
  14. Whole-Genome Sequence ofGenome announcements · 2017
    Article
  15. Insight of GenusFrontiers in microbiology · 2017
    Review
  16. Genomic analysis of four strains ofStandards in genomic sciences · 2017
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Anne Cybelle Pinto
Pablo Henrique Caracciolo Gomes de Sá
Rommel T J Ramos
Silvanira Barbosa
Hivana P Melo Barbosa
Adriana Carneiro Ribeiro
Wanderson Marques Silva
Flávia Souza Rocha
Mariana Passos Santana
Thiago Luiz de Paula Castro
Anderson Miyoshi
Maria P C Schneider
Artur Silva
Vasco AzevedoDepartment of General Biology, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Av, Antônio Carlos, Belo Horizonte 31,270-901, Brazil. vasco@icb.ufmg.br.
Universidade Federal de Minas Gerais · BRUniversidade Federal do Pará · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe completion of whole-genome sequencing for Corynebacterium pseudotuberculosis strain 1002 has contributed to major advances in research aimed at understanding the biology of this microorganism. This bacterium causes significant loss to goat and sheep farmers because it is the causal agent of the infectious disease caseous lymphadenitis, which may lead to outcomes ranging from skin injury to animal death. In the current study, we simulated the conditions experienced by the bacteria during host infection. By sequencing transcripts using the SOLiDTM 3 Plus platform, we identified new targets expected to potentiate the survival and replication of the pathogen in adverse environments. These results may also identify possible candidates useful for the development of vaccines, diagnostic kits or therapies aimed at the reduction of losses in agribusiness.

resultsUnder the 3 simulated conditions (acid, osmotic and thermal shock stresses), 474 differentially expressed genes exhibiting at least a 2-fold change in expression levels were identified. Important genes to the infection process were induced, such as those involved in virulence, defence against oxidative stress, adhesion and regulation, and many genes encoded hypothetical proteins, indicating that further investigation of the bacterium is necessary. The data will contribute to a better understanding of the biology of C. pseudotuberculosis and to studies investigating strategies to control the disease.

conclusionsDespite the veterinary importance of C. pseudotuberculosis, the bacterium is poorly characterised; therefore, effective treatments for caseous lymphadenitis have been difficult to establish. Through the use of RNAseq, these results provide a better biological understanding of this bacterium, shed light on the most likely survival mechanisms used by this microorganism in adverse environments and identify candidates that may help reduce or even eradicate the problems caused by this disease.

Indexed as

Genes, BacterialStress, PhysiologicalBacterial ProteinsCorynebacterium pseudotuberculosisDown-RegulationHydrogen-Ion ConcentrationOsmotic PressureRNA, UntranslatedSequence Analysis, DNASigma FactorTemperatureUp-RegulationBacterial ProteinsRNA, UntranslatedSigma Factor

Identifiers

PMID24405787
PMCPMC3890534
OpenAlexW2026274850

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.