Evidence map›Paper›PMID 24405752›Full record

ArticleMetabolism: clinical and experimental2014

Genome-wide association study identifies common loci influencing circulating glycated hemoglobin (HbA1c) levels in non-diabetic subjects: the Long Life Family Study (LLFS).

Ping An, Iva Miljkovic, Bharat Thyagarajan, Aldi T Kraja, E Warwick Daw, James S Pankow, Elizabeth Selvin, W H Linda Kao, Nisa M Maruthur, Micahel A Nalls and 10 more

Abstract read
In one paragraph

Article in Metabolism: clinical and experimental, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 3 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 3 syntheses or guidelines pooled it, 29 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Evidence of a novel gene locusPhysiological genomics · 2025
    Article
  5. A Novel GenebioRxiv : the preprint server for biology · 2024
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  6. Article
  7. Variants influencing age at diagnosis of HNF1A-MODY.Molecular medicine (Cambridge, Mass.) · 2022
    Article
  8. NIA Long Life Family Study: Objectives, Design, and Heritability of Cross-Sectional and Longitudinal Phenotypes.The journals of gerontology. Series A, Biological sciences and medical sciences · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 9 institutions in 2 countries.

Ping AnDepartment of Genetics Division of Statistical Genomics, Washington University School of Medicine, St. Louis, MO, USA. Electronic address: anping@wustl.edu.
Iva MiljkovicUniversity of Pittsburgh, Graduate School of Public Health, Department of Epidemiology, Center for Aging and Population Health, Pittsburgh, PA, USA.
Bharat ThyagarajanDepartment of Laboratory Medicine and Pathology, University of Minnesota, Minneapolis, MN, USA.
Aldi T KrajaDepartment of Genetics Division of Statistical Genomics, Washington University School of Medicine, St. Louis, MO, USA.
E Warwick DawDepartment of Genetics Division of Statistical Genomics, Washington University School of Medicine, St. Louis, MO, USA.
James S PankowDivision of Epidemiology and Community Health, University of Minnesota, Minneapolis, MN, USA.
Elizabeth SelvinDepartment of Epidemiology, Johns Hopkins University, Baltimore, MD, USA.
W H Linda KaoDepartment of Epidemiology, Johns Hopkins University, Baltimore, MD, USA.
Nisa M MaruthurDivision of General Internal Medicine, Johns Hopkins University, Baltimore, MD, USA.
Micahel A NallsLaboratory of Neurogenetics, NIA/NIH, Bethesda, MD, USA.
Yongmei LiuDepartment of Epidemiology and Prevention, Division of Public Health Sciences, Wake Forest University, Winston-Salem, NC, USA.
Tamara B HarrisLaboratory of Epidemiology, Demography and Biometry, NIA/NIH, Bethesda, MD, USA.
Joseph H LeeGertrude H. Sergievsky Center and the Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York City, NY, USA.
Ingrid B BoreckiDepartment of Genetics Division of Statistical Genomics, Washington University School of Medicine, St. Louis, MO, USA.
Kaare ChristensenDanish Aging Research Center, Epidemiology, University of Southern Denmark, Odense, Denmark; Department of Clinical Biochemistry and Pharmacology and Department of Clinical Genetics, Odense University Hospital, Odense, Denmark.
John H EckfeldtDepartment of Laboratory Medicine and Pathology, University of Minnesota, Minneapolis, MN, USA.
Richard MayeuxGertrude H. Sergievsky Center and the Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York City, NY, USA.
Thomas T PerlsDivision of Geriatrics, Department of Medicine, Boston University Medical Center, Boston, MA, USA.
Anne B NewmanUniversity of Pittsburgh, Graduate School of Public Health, Department of Epidemiology, Center for Aging and Population Health, Pittsburgh, PA, USA.
Michael A ProvinceDepartment of Genetics Division of Statistical Genomics, Washington University School of Medicine, St. Louis, MO, USA.
Washington University in St. Louis · USJohns Hopkins University · USUniversity of Minnesota · USColumbia University · USNational Institutes of Health · USUniversity of Pittsburgh · USBoston Medical Center · USOdense University Hospital · DKWake Forest University · US

Funding

Systems BiologyU19AG023122 · NIA · TRANSLATIONAL GENOMICS RESEARCH INST · PI PAOLA SEBASTIANI · 2004 to 2026
$102.6M
Institute for Clinical and Translational Research (UL1)UL1RR025005 · NCRR · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2007 to 2011
$75.8M
Institute for Clinical and Translational ResearchUL1TR001079 · NCATS · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2013 to 2017
$60.1M
Satellite Diagnostic and Treatment Clinic CoreP50AG008702 · NIA · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI BELL, KAREN L. · 1989 to 2019
$46.3M
Long Life Family Study: Data Management and Coordinating CenterU01AG023746 · NIA · WASHINGTON UNIVERSITY · PI PROVINCE, MICHAEL A. · 2004 to 2018
$29.2M
VARIABILITY, STABILITY & SMOOTHNESS OF WALKINGP30AG024827 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JENNIFER S BRACH · 2004 to 2026
$28.6M
Genome-Wide Association Analysis in Essential Hypertension (FEHGAS study)R01HL086694 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ARAVINDA CHAKRAVARTI · 2007 to 2026
$21.2M
The Long Life Family StudyU01AG023755 · NIA · BOSTON MEDICAL CENTER · PI PERLS, THOMAS T · 2004 to 2018
$13.2M
Plasma beta-amyloid in long lived families: genetics and risk of ADU01AG023749 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI COSENTINO, STEPHANIE ANN, LEE, JOSEPH HYUNGWOO · 2004 to 2018
$13.0M
STALLARD Admin Supp: Predicting Future Care Needs and Costs for Individual Medicare Enrollees with Incident Suspected Alzheimer's DiseaseP30AG034424 · NIA · DUKE UNIVERSITY · PI SCOTT M. LYNCH · 2009 to 2026
$12.2M
Multicenter Study on Exceptional Survival in Families: The Long Life Family StudyU01AG023744 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI NEWMAN, ANNE B., ZMUDA, JOSEPH M. · 2004 to 2018
$12.0M
Epidemiology of Venous Thrombosis & Pulmonary EmbolismR01HL059367 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI TANG, WEIHONG · 1998 to 2024
$11.8M
Intramural NIH HHSNCATS NIH HHS UL1 TR001079NCRR NIH HHS UL1 RR025005NCRR NIH HHS UL1RR025005NHGRI NIH HHS HHSN268200782096CNHGRI NIH HHS U01 HG004402NHGRI NIH HHS U01HG004402NHLBI NIH HHS HHSN268201100005CNHLBI NIH HHS HHSN268201100005GNHLBI NIH HHS HHSN268201100005INHLBI NIH HHS HHSN268201100006CNHLBI NIH HHS HHSN268201100007CNHLBI NIH HHS HHSN268201100007INHLBI NIH HHS HHSN268201100008CNHLBI NIH HHS HHSN268201100008INHLBI NIH HHS HHSN268201100009CNHLBI NIH HHS HHSN268201100009INHLBI NIH HHS HHSN268201100010CNHLBI NIH HHS HHSN268201100011CNHLBI NIH HHS HHSN268201100011INHLBI NIH HHS HHSN268201100012CNHLBI NIH HHS R01 HL059367NHLBI NIH HHS R01 HL086694NHLBI NIH HHS R01HL086694NHLBI NIH HHS R01 HL087641NHLBI NIH HHS R01HL087641NHLBI NIH HHS R01HL59367NHLBI NIH HHS R21 HL114237NHLBI NIH HHS R21HL114237NIA NIH HHS 1R01AG032098-01A1NIA NIH HHS K24 AG025727NIA NIH HHS K24AG025727NIA NIH HHS N01 AG062101NIA NIH HHS N01 AG062103NIA NIH HHS N01 AG062106NIA NIH HHS P30 AG024827NIA NIH HHS P30 AG034424NIA NIH HHS P50 AG008702NIA NIH HHS R01 AG032098NIA NIH HHS R01 AG032319NIA NIH HHS R01AG032319NIA NIH HHS U01 AG023712NIA NIH HHS U01AG023712NIA NIH HHS U01 AG023744NIA NIH HHS U01AG023744NIA NIH HHS U01 AG023746NIA NIH HHS U01AG023746NIA NIH HHS U01 AG023749NIA NIH HHS U01AG023749NIA NIH HHS U01 AG023755NIA NIH HHS U01AG023755NIA NIH HHS U19 AG023122NIA NIH HHS U19AG023122NIDDK NIH HHS K01 DK076595NIDDK NIH HHS K01DK076595NIDDK NIH HHS P30 DK079637NIDDK NIH HHS R21 DK080294NIDDK NIH HHS R21DK080294PHS HHS HHSN268200625226CPHS HHS K01067207
6 · The paper itself

Abstract

objectiveGlycated hemoglobin (HbA1c) is a stable index of chronic glycemic status and hyperglycemia associated with progressive development of insulin resistance and frank diabetes. It is also associated with premature aging and increased mortality. To uncover novel loci for HbA1c that are associated with healthy aging, we conducted a genome-wide association study (GWAS) using non-diabetic participants in the Long Life Family Study (LLFS), a study with familial clustering of exceptional longevity in the US and Denmark.

methodsA total of 4088 non-diabetic subjects from the LLFS were used for GWAS discoveries, and a total of 8231 non-diabetic subjects from the Atherosclerosis Risk in Communities Study (ARIC, in the MAGIC Consortium) and the Health, Aging, and Body Composition Study (HABC) were used for GWAS replications. HbA1c was adjusted for age, sex, centers, 20 principal components, without and with BMI. A linear mixed effects model was used for association testing.

resultsTwo known loci at GCK rs730497 (or rs2908282) and HK1 rs17476364 were confirmed (p<5e-8). Of 25 suggestive (5e-8<p<1e-5) loci, one known (G6PC2 rs560887, replication p=5e-5) and one novel (OR10R3P/SPTA1- rs12041363, replication p=1e-17) loci were replicated (p<0.0019). Similar findings resulted when HbA1c was further adjusted for BMI. Further validations are crucial for the remaining suggestive loci including the emerged variant near OR10R3P/SPTA1.

conclusionsThe analysis reconfirmed two known GWAS loci (GCK, HK1) and identified 25 suggestive loci including one reconfirmed variant in G6PC2 and one replicated variant near OR10R3P/SPTA1. Future focused survey of sequence elements containing mainly functional and regulatory variants may yield additional findings.

Indexed as

Genome-Wide Association StudyLongevityAgedCohort StudiesDenmarkDiabetes MellitusFemaleGenotypeGlycated HemoglobinHumansMaleMiddle AgedPhenotypeUnited StatesGlycated Hemoglobinhemoglobin A1c protein, humanGenome-wide association studyGlucoseInsulin resistance and diabetesNon-enzymatic glycationPremature aging processes

Identifiers

PMID24405752
PMCPMC3965585
OpenAlexW2071052961

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.