Evidence map›Paper›PMID 24402368›Full record

ArticleMicrobial ecology2014

Ecological diversification of Vibrio fischeri serially passaged for 500 generations in novel squid host Euprymna tasmanica.

William Soto, Ferdinand M Rivera, Michele K Nishiguchi

Abstract read
In one paragraph

Article in Microbial ecology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Applied and environmental microbiology · 2025
    Article
  3. Host-Associated Biofilms:Microorganisms · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Adaptation to pH stress byMicrobiology (Reading, England) · 2020
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

William SotoDepartment of Ecology, Evolution, & Behavior, University of Minnesota-Twin Cities, 100 Ecology Building, 1987 Upper Buford Circle, Saint Paul, MN, 55108, USA, wsoto@umn.edu.
Ferdinand M Rivera
Michele K Nishiguchi
New Mexico State University · USUniversity of Minnesota · US

Funding

RISE PROGRAM AT NEW MEXICO STATE UNIVERSITYR25GM061222 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI HOUSTON, JESSICA PEREA, REDDI, LAKSHMI · 2000 to 2022
$21.3M
Undergraduate Biomedical Research Training at New Mexico State Univ., Las CrucesT34GM007667 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI UNGUEZ, GRACIELA ALEXANDRA · 1985 to 2022
$13.6M
Selection of host specific genes in environmentally transmitted mutualismSC1AI081659 · NIAID · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI NISHIGUCHI, MICHELE KIYOKO · 2008 to 2011
$1.2M
NIAID NIH HHS 1SC1AI081659NIAID NIH HHS 3SC1AI081659-02S1NIAID NIH HHS SC1 AI081659NIGMS NIH HHS GM07667-35NIGMS NIH HHS R25 GM061222NIGMS NIH HHS R25GM061222NIGMS NIH HHS T34 GM007667
6 · The paper itself

Abstract

Vibrio fischeri isolated from Euprymna scolopes (Cephalopoda: Sepiolidae) was used to create 24 lines that were serially passaged through the non-native host Euprymna tasmanica for 500 generations. These derived lines were characterized for biofilm formation, swarming motility, carbon source utilization, and in vitro bioluminescence. Phenotypic assays were compared between "ES" (E. scolopes) and "ET" (E. tasmanica) V. fischeri wild isolates to determine if convergent evolution was apparent between E. tasmanica evolved lines and ET V. fischeri. Ecological diversification was observed in utilization of most carbon sources examined. Convergent evolution was evident in motility, biofilm formation, and select carbon sources displaying hyperpolymorphic usage in V. fischeri. Convergence in bioluminescence (a 2.5-fold increase in brightness) was collectively evident in the derived lines relative to the ancestor. However, dramatic changes in other properties--time points and cell densities of first light emission and maximal light output and emergence of a lag phase in growth curves of derived lines--suggest that increased light intensity per se was not the only important factor. Convergent evolution implies that gnotobiotic squid light organs subject colonizing V. fischeri to similar selection pressures. Adaptation to novel hosts appears to involve flexible microbial metabolism, establishment of biofilm and swarmer V. fischeri ecotypes, and complex changes in bioluminescence. Our data demonstrate that numerous alternate fitness optima or peaks are available to V. fischeri in host adaptive landscapes, where novel host squids serve as habitat islands. Thus, V. fischeri founder flushes occur during the initiation of light organ colonization that ultimately trigger founder effect diversification.

Indexed as

Biological EvolutionAliivibrio fischeriAnimalsBiofilmsCarbonDecapodiformesLuminescent MeasurementsSelection, GeneticCarbon

Identifiers

PMID24402368
PMCPMC3965629
OpenAlexW2019008052

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.