Evidence map›Paper›PMID 24401024›Full record

ArticleMicrobial cell factories2014

A single vector-based strategy for marker-less gene replacement in Synechocystis sp. PCC 6803.

Stefania Viola, Thilo Rühle, Dario Leister

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  6. Metabolic engineering ofMetabolic engineering communications · 2021
    Article
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  14. Enhancing (crop) plant photosynthesis by introducing novel genetic diversity.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Article
  15. Article
  16. Review
  17. Photosystem II Assembly from Scratch.Frontiers in plant science · 2015
    Article
  18. Cyanobacteria as cell factories to produce plant secondary metabolites.Frontiers in bioengineering and biotechnology · 2015
    Review
  19. Synechocystis: Not Just a Plug-Bug for CO2, but a Green E. coli.Frontiers in bioengineering and biotechnology · 2014
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Stefania Viola
Thilo Rühle
Dario LeisterDepartment Biology I, Ludwig-Maximilians-Universität München, Großhaderner Str, 2, Planegg, Martinsried D-82152, Germany. leister@lmu.de.
Ludwig-Maximilians-Universität München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe cyanobacterium Synechocystis sp. PCC 6803 is widely used for research on photosynthesis and circadian rhythms, and also finds application in sustainable biotechnologies. Synechocystis is naturally transformable and undergoes homologous recombination, which enables the development of a variety of tools for genetic and genomic manipulations. To generate multiple gene deletions and/or replacements, marker-less manipulation methods based on counter-selection are generally employed. Currently available methods require two transformation steps with different DNA plasmids.

resultsIn this study, we present a marker-less gene deletion and replacement strategy in Synechocystis sp. PCC 6803 which needs only a single transformation step. The method utilizes an nptI-sacB double selection cassette and exploits the ability of the cyanobacterium to undergo two successive genomic recombination events via double and single crossing-over upon application of appropriate selective procedures.

conclusionsBy reducing the number of cloning steps, this strategy will facilitate gene manipulation, gain-of-function studies, and automated screening of mutants.

Indexed as

Bacterial ProteinsGenetic EngineeringGenetic VectorsHomologous RecombinationSynechocystisBacterial Proteins

Identifiers

PMID24401024
PMCPMC3893515
OpenAlexW2136118838

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.