Evidence map›Paper›PMID 24400011›Full record

ArticleFrontiers in plant science2013

Unlocking the potential of tropical root crop biotechnology in east Africa by establishing a genetic transformation platform for local farmer-preferred cassava cultivars.

Evans Nyaboga, Joshua Njiru, Edward Nguu, Wilhelm Gruissem, Herve Vanderschuren, Leena Tripathi

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
7.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 47 citations in OpenAlex.

  1. Constitutive overexpression ofFrontiers in plant science · 2024
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. International journal of molecular sciences · 2019
    Article
  9. Article
  10. Overexpression of rice thaumatin-like protein (Journal, genetic engineering & biotechnology · 2018
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. The potential of using biotechnology to improve cassava: a review.In vitro cellular & developmental biology. Plant : journal of the Tissue Culture Association
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Evans NyabogaInternational Institute of Tropical Agriculture Nairobi, Kenya ; Department of Biology, Plant Biotechnology, Eidgenössische Technische Hochschule Zurich, Switzerland ; Department of Biochemistry, University of Nairobi Nairobi, Kenya.
Joshua NjiruInternational Institute of Tropical Agriculture Nairobi, Kenya.
Edward NguuDepartment of Biochemistry, University of Nairobi Nairobi, Kenya.
Wilhelm GruissemDepartment of Biology, Plant Biotechnology, Eidgenössische Technische Hochschule Zurich, Switzerland.
Herve VanderschurenDepartment of Biology, Plant Biotechnology, Eidgenössische Technische Hochschule Zurich, Switzerland.
Leena TripathiInternational Institute of Tropical Agriculture Nairobi, Kenya.
Board of the Swiss Federal Institutes of Technology · CHInternational Institute of Tropical Agriculture · KEUniversity of Nairobi · KE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cassava genetic transformation capacity is still mostly restricted to advanced laboratories in the USA, Europe and China; and its implementation and maintenance in African laboratories has remained scarce. The impact of transgenic technologies for genetic improvement of cassava will depend largely on the transfer of such capabilities to researchers in Africa, where cassava has an important socioeconomic niche. A major constraint to the development of genetic transformation technologies for cassava improvement has been the lack of an efficient and robust transformation and regeneration system. Despite the success achieved in genetic modification of few cassava cultivars, including the model cultivar 60444, transgenic cassava production remains difficult for farmer-preferred cultivars. In this study, a protocol for cultivar 60444 developed at ETH Zurich was successfully implemented and optimized to establish transformation of farmer-preferred cassava cultivars popular in east Africa. The conditions for production and proliferation of friable embryogenic calli (FEC) and Agrobacterium-mediated transformation were optimized for three east African farmer-preferred cultivars (Ebwanatereka, Kibandameno and Serere). Our results demonstrated transformation efficiencies of about 14-22 independent transgenic lines per 100 mg of FEC for farmer-preferred cultivars in comparison to 28 lines per 100 mg of the model cultivar 60444. The presence, integration and expression of the transgenes were confirmed by PCR, Southern blot analysis and histochemical GUS assay. This study reports the establishment of a cassava transformation platform at International Institute of Tropical Agriculture (IITA) hosted by Biosciences eastern and central Africa (BecA) hub in Kenya and provides the basis for transferring important traits such as virus resistance and prolonged shelf-life to farmer-preferred cultivars in east Africa. We anticipate that such platform will also be instrumental to transfer technologies to national agricultural research systems (NARS) in sub-Saharan Africa.

Indexed as

Agrobacterium tumefacienscassavafarmer-preferred cultivarsfriable embryogenic callusgenetic transformation

Identifiers

PMID24400011
PMCPMC3872047
OpenAlexW2124109750

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.