Evidence map›Paper›PMID 24398561›Full record

ArticleCell cycle (Georgetown, Tex.)2014

Autoregulation of lin-4 microRNA transcription by RNA activation (RNAa) in C. elegans.

Michael J Turner, Alan L Jiao, Frank J Slack

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. RNA activation in ticks.Scientific reports · 2023
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
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  15. Review
  16. Article
  17. Article
  18. Article
  19. MicroRNA in Control of Gene Expression: An Overview of Nuclear Functions.International journal of molecular sciences · 2016
    Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Michael J TurnerDepartment of Molecular, Cellular and Developmental Biology; Yale University; New Haven, CT USA.
Alan L JiaoDepartment of Molecular, Cellular and Developmental Biology; Yale University; New Haven, CT USA.
Frank J SlackDepartment of Molecular, Cellular and Developmental Biology; Yale University; New Haven, CT USA.
University of New Haven · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
MicroRNAs in agingR01AG033921 · NIA · YALE UNIVERSITY · PI SLACK, FRANK J. · 2009 to 2018
$3.3M
NIA NIH HHS AG033921NIA NIH HHS R01 AG033921NIGMS NIH HHS GM06401NIH HHS P40 OD010440
6 · The paper itself

Abstract

The conserved lin-4 microRNA (miRNA) regulates the proper timing of stem cell fate decisions in C. elegans by regulating stemness genes such as lin-14 and lin-28. (1)(-) (3) While lin-4 is upregulated toward the end of the first larval stage and functions as an essential developmental timing "switch", little is known about how lin-4 expression is regulated. (4) Here we show that in C. elegans hypodermal seam cells, transcription of lin-4 is positively regulated by lin-4 itself. In these cells, lin-4 activates its own transcription through a conserved lin-4-complementary element (LCE) in its promoter. We further show that lin-4 is required to recruit RNA polymerase II to its own promoter, and that lin-4 overexpression is sufficient for autoactivation. Finally, we show that a protein complex specifically binds the LCE in vitro, and that mutations that abolish this binding also reduce the in vivo expression of a plin-4:GFP reporter. Thus, we describe the first in vivo evidence of RNA activation (RNAa) by an endogenous miRNA, and provide new insights into an elegant autoregulatory mechanism that ensures the proper timing of stem cell fate decisions in development.

Indexed as

AnimalsBase SequenceCaenorhabditis elegansHomeostasisMicroRNAsMolecular Sequence DataMutationPromoter Regions, GeneticRNA, HelminthRNA Polymerase IIStem CellsTranscriptional Activationlin-4 microRNA, C elegansMicroRNAsRNA, HelminthRNA Polymerase IIheterochroniclin-4microRNAmiRNARNAaRNA activationseam cellstem cell

Identifiers

PMID24398561
PMCPMC3979913
OpenAlexW1966559009

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.