Evidence map›Paper›PMID 24398521›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Fatty acid synthesis is inhibited by inefficient utilization of unusual fatty acids for glycerolipid assembly.

Philip D Bates, Sean R Johnson, Xia Cao, Jia Li, Jeong-Won Nam, Jan G Jaworski, John B Ohlrogge, John Browse

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
8.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 146 citations in OpenAlex.

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  9. Targeted engineering of camelina and pennycress seeds for ultrahigh accumulation of acetyl-TAG.Proceedings of the National Academy of Sciences of the United States of America · 2024
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14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Philip D BatesDepartment of Chemistry and Biochemistry, The University of Southern Mississippi, Hattiesburg, MS 39402.
Sean R Johnson
Xia Cao
Jia Li
Jeong-Won Nam
Jan G Jaworski
John B Ohlrogge
John Browse
Donald Danforth Plant Science Center · USMichigan State University · USWashington State University · USUniversity of Southern Mississippi · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Degradation of unusual fatty acids through β-oxidation within transgenic plants has long been hypothesized as a major factor limiting the production of industrially useful unusual fatty acids in seed oils. Arabidopsis seeds expressing the castor fatty acid hydroxylase accumulate hydroxylated fatty acids up to 17% of total fatty acids in seed triacylglycerols; however, total seed oil is also reduced up to 50%. Investigations into the cause of the reduced oil phenotype through in vivo [(14)C]acetate and [(3)H]2O metabolic labeling of developing seeds surprisingly revealed that the rate of de novo fatty acid synthesis within the transgenic seeds was approximately half that of control seeds. RNAseq analysis indicated no changes in expression of fatty acid synthesis genes in hydroxylase-expressing plants. However, differential [(14)C]acetate and [(14)C]malonate metabolic labeling of hydroxylase-expressing seeds indicated the in vivo acetyl-CoA carboxylase activity was reduced to approximately half that of control seeds. Therefore, the reduction of oil content in the transgenic seeds is consistent with reduced de novo fatty acid synthesis in the plastid rather than fatty acid degradation. Intriguingly, the coexpression of triacylglycerol synthesis isozymes from castor along with the fatty acid hydroxylase alleviated the reduced acetyl-CoA carboxylase activity, restored the rate of fatty acid synthesis, and the accumulation of seed oil was substantially recovered. Together these results suggest a previously unidentified mechanism that detects inefficient utilization of unusual fatty acids within the endoplasmic reticulum and activates an endogenous pathway for posttranslational reduction of fatty acid synthesis within the plastid.

Indexed as

Acetyl-CoA CarboxylaseArabidopsisEndoplasmic ReticulumFatty AcidsFeedback, PhysiologicalGene Expression ProfilingGene Expression Regulation, PlantLipidsOxygenPlant OilsPlants, Genetically ModifiedPlastidsProtein Processing, Post-TranslationalRNASeedsTime FactorsAcetyl-CoA CarboxylaseFatty AcidsLipidsOxygenPlant OilsRNATriglyceridesfeedback inhibitionmetabolic engineeringβ-oxidation

Identifiers

PMID24398521
PMCPMC3903203
OpenAlexW2055465845

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.