Evidence map›Paper›PMID 24395781›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Chitin-induced activation of immune signaling by the rice receptor CEBiP relies on a unique sandwich-type dimerization.

Masahiro Hayafune, Rita Berisio, Roberta Marchetti, Alba Silipo, Miyu Kayama, Yoshitake Desaki, Sakiko Arima, Flavia Squeglia, Alessia Ruggiero, Ken Tokuyasu and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 134 papers.

0numbers the graph read from it
0cells of the map it votes in
134citing papers in PubMed
43.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

134 citing papers in PubMed, 344 citations in OpenAlex.

  1. Mechanisms and balanced regulation of plant immunity.Nature reviews. Molecular cell biology · 2026
    Review
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  10. Transcriptomic profiling of wheat (Frontiers in plant science · 2026
    Article
  11. Article
  12. Article
  13. Plant signaling & behavior · 2025
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

74 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 3 countries.

Masahiro HayafuneDepartment of Life Sciences, School of Agriculture, Meiji University, Kawasaki 214-8571, Japan.
Rita Berisio
Roberta Marchetti
Alba Silipo
Miyu Kayama
Yoshitake Desaki
Sakiko Arima
Flavia Squeglia
Alessia Ruggiero
Ken Tokuyasu
Antonio Molinaro
Hanae Kaku
Naoto Shibuya
Meiji University · JPUniversity of Naples Federico II · ITNational Research Council · ITFood Research Institute · JPNational Academies of Sciences, Engineering, and Medicine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Perception of microbe-associated molecular patterns (MAMPs) through pattern recognition receptors (PRRs) triggers various defense responses in plants. This MAMP-triggered immunity plays a major role in the plant resistance against various pathogens. To clarify the molecular basis of the specific recognition of chitin oligosaccharides by the rice PRR, CEBiP (chitin-elicitor binding protein), as well as the formation and activation of the receptor complex, biochemical, NMR spectroscopic, and computational studies were performed. Deletion and domain-swapping experiments showed that the central lysine motif in the ectodomain of CEBiP is essential for the binding of chitin oligosaccharides. Epitope mapping by NMR spectroscopy indicated the preferential binding of longer-chain chitin oligosaccharides, such as heptamer-octamer, to CEBiP, and also the importance of N-acetyl groups for the binding. Molecular modeling/docking studies clarified the molecular interaction between CEBiP and chitin oligosaccharides and indicated the importance of Ile122 in the central lysine motif region for ligand binding, a notion supported by site-directed mutagenesis. Based on these results, it was indicated that two CEBiP molecules simultaneously bind to one chitin oligosaccharide from the opposite side, resulting in the dimerization of CEBiP. The model was further supported by the observations that the addition of (GlcNAc)8 induced dimerization of the ectodomain of CEBiP in vitro, and the dimerization and (GlcNAc)8-induced reactive oxygen generation were also inhibited by a unique oligosaccharide, (GlcNβ1,4GlcNAc)4, which is supposed to have N-acetyl groups only on one side of the molecule. Based on these observations, we proposed a hypothetical model for the ligand-induced activation of a receptor complex, involving both CEBiP and Oryza sativa chitin-elicitor receptor kinase-1.

Indexed as

Plant ImmunitySignal TransductionAmino Acid MotifsAmino Acid SequenceBinding SitesChitinEpitopesLigandsLysineMagnetic Resonance SpectroscopyMolecular Sequence DataMutagenesis, Site-DirectedNicotianaOligosaccharidesOryzaPlant ProteinsChitinEpitopesLigandsLysineOligosaccharidesPlant ProteinsReactive Oxygen SpeciesReceptors, Cell Surfacechitin signalingLysM-receptorMTI/PTIplant immunityreceptor–ligand interaction

Identifiers

PMID24395781
PMCPMC3903257
OpenAlexW2090754558

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.