Evidence map›Paper›PMID 24394419›Full record

ArticleThe Journal of biological chemistry2014

Tight control of hypoxia-inducible factor-α transient dynamics is essential for cell survival in hypoxia.

James Bagnall, Joseph Leedale, Sarah E Taylor, David G Spiller, Michael R H White, Kieran J Sharkey, Rachel N Bearon, Violaine Sée

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 72 citations in OpenAlex.

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  17. Oxygen-sensing mechanisms in development and tissue repair.Development (Cambridge, England) · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

James BagnallFrom the Centre for Cell Imaging, Institute of Integrative Biology, and.
Joseph Leedale
Sarah E Taylor
David G Spiller
Michael R H White
Kieran J Sharkey
Rachel N Bearon
Violaine Sée
University of Liverpool · GBInstitut de Biologie Intégrative de la Cellule · FR

Funding

Biotechnology and Biological Sciences Research Council BB/C520471/1Biotechnology and Biological Sciences Research Council BB/F005938/1Medical Research Council MR/K015931/1
6 · The paper itself

Abstract

Intracellular signaling involving hypoxia-inducible factor (HIF) controls the adaptive responses to hypoxia. There is a growing body of evidence demonstrating that intracellular signals encode temporal information. Thus, the dynamics of protein levels, as well as protein quantity and/or localization, impacts on cell fate. We hypothesized that such temporal encoding has a role in HIF signaling and cell fate decisions triggered by hypoxic conditions. Using live cell imaging in a controlled oxygen environment, we observed transient 3-h pulses of HIF-1α and -2α expression under continuous hypoxia. We postulated that the well described prolyl hydroxylase (PHD) oxygen sensors and HIF negative feedback regulators could be the origin of the pulsatile HIF dynamics. We used iterative mathematical modeling and experimental analysis to scrutinize which parameter of the PHD feedback could control HIF timing and we probed for the functional redundancy between the three main PHD proteins. We identified PHD2 as the main PHD responsible for HIF peak duration. We then demonstrated that this has important consequences, because the transient nature of the HIF pulse prevents cell death by avoiding transcription of p53-dependent pro-apoptotic genes. We have further shown the importance of considering HIF dynamics for coupling mathematical models by using a described HIF-p53 mathematical model. Our results indicate that the tight control of HIF transient dynamics has important functional consequences on the cross-talk with key signaling pathways controlling cell survival, which is likely to impact on HIF targeting strategies for hypoxia-associated diseases such as tumor progression and ischemia.

Indexed as

ApoptosisBasic Helix-Loop-Helix ProteinsCell HypoxiaCell SurvivalEndothelial PAS Domain-Containing Protein 1HeLa CellsHumansHypoxia-Inducible Factor 1, alpha SubunitHypoxia-Inducible Factor-Proline DioxygenasesNeoplasmsSignal TransductionTumor Suppressor Protein p53Basic Helix-Loop-Helix ProteinsEGLN1 protein, humanEndothelial PAS Domain-Containing Protein 1HIF1A protein, humanHypoxia-Inducible Factor 1, alpha SubunitHypoxia-Inducible Factor-Proline DioxygenasesTP53 protein, humanTumor Suppressor Protein p53Cell DeathHypoxiaHypoxia-inducible FactorImagingMathematical ModelingNegative Feedback Loopp53Prolyl Hydroxylase

Identifiers

PMID24394419
PMCPMC3937633
OpenAlexW2086287378

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.