Evidence map›Paper›PMID 24393772›Full record

ArticleNucleic acids research2014

A novel intermediate in transcription initiation by human mitochondrial RNA polymerase.

Yaroslav I Morozov, Karen Agaronyan, Alan C M Cheung, Michael Anikin, Patrick Cramer, Dmitry Temiakov

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
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  8. Mechanisms and regulation of human mitochondrial transcription.Nature reviews. Molecular cell biology · 2024
    Review
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  18. Dynamic features of human mitochondrial DNA maintenance and transcription.Frontiers in cell and developmental biology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Yaroslav I MorozovDepartment of Cell Biology, School of Osteopathic Medicine, Rowan University, Medical Center Dr, Stratford, NJ 08084, USA and Gene Center and Department of Biochemistry, Center for Integrated Protein Science Munich (CIPSM), Ludwig-Maximilians-Universität München, Feodor-Lynen-Strasse 25, 81377 Munich, Germany.
Karen Agaronyan
Alan C M Cheung
Michael Anikin
Patrick Cramer
Dmitry Temiakov
Center for Integrated Protein Science Munich · DERowan University · USLudwig-Maximilians-Universität München · DE

Funding

Mechanisms of transcription initiation in mitochondriaR01GM104231 · NIGMS · UNIV OF MED/DENT NJ-SCH OSTEOPATHIC MED · PI TEMIAKOV, DMITRY · 2013 to 2017
$1.5M
NIGMS NIH HHS R01 GM104231NIGMS NIH HHS R01GM104231Wellcome Trust 102535
6 · The paper itself

Abstract

The mitochondrial genome is transcribed by a single-subunit T7 phage-like RNA polymerase (mtRNAP), structurally unrelated to cellular RNAPs. In higher eukaryotes, mtRNAP requires two transcription factors for efficient initiation-TFAM, a major nucleoid protein, and TFB2M, a transient component of mtRNAP catalytic site. The mechanisms behind assembly of the mitochondrial transcription machinery and its regulation are poorly understood. We isolated and identified a previously unknown human mitochondrial transcription intermediate-a pre-initiation complex that includes mtRNAP, TFAM and promoter DNA. Using protein-protein cross-linking, we demonstrate that human TFAM binds to the N-terminal domain of mtRNAP, which results in bending of the promoter DNA around mtRNAP. The subsequent recruitment of TFB2M induces promoter melting and formation of an open initiation complex. Our data indicate that the pre-initiation complex is likely to be an important target for transcription regulation and provide basis for further structural, biochemical and biophysical studies of mitochondrial transcription.

Indexed as

Transcription Initiation, GeneticDNA-Binding ProteinsDNA-Directed RNA PolymerasesHumansMitochondrial ProteinsPromoter Regions, GeneticProtein Interaction Domains and MotifsTranscription FactorsDNA-Binding ProteinsDNA-Directed RNA PolymerasesMitochondrial ProteinsPOLRMT protein, humanTFAM protein, humanTranscription Factors

Identifiers

PMID24393772
PMCPMC3973326
OpenAlexW2001294926

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.