Evidence map›Paper›PMID 24392146›Full record

ArticlePloS one2014

Proteomic analysis of proton beam irradiated human melanoma cells.

Sylwia Kedracka-Krok, Urszula Jankowska, Martyna Elas, Urszula Sowa, Jan Swakon, Agnieszka Cierniak, Pawel Olko, Bozena Romanowska-Dixon, Krystyna Urbanska

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Role of caprin-1 in carcinogenesis.Oncology letters · 2019
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sylwia Kedracka-KrokFaculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Kraków, Poland ; Malopolska Centre of Biotechnology, Krakow, Poland.
Urszula JankowskaFaculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Kraków, Poland ; Malopolska Centre of Biotechnology, Krakow, Poland.
Martyna ElasFaculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Kraków, Poland.
Urszula SowaInstitute of Nuclear Physics, PAS, Kraków, Poland.
Jan SwakonInstitute of Nuclear Physics, PAS, Kraków, Poland.
Agnieszka CierniakFaculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Kraków, Poland.
Pawel OlkoInstitute of Nuclear Physics, PAS, Kraków, Poland.
Bozena Romanowska-DixonDepartment of Ophthalmology and Ophthalmic Oncology, Jagiellonian University Medical College, Kraków, Poland.
Krystyna UrbanskaFaculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Kraków, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proton beam irradiation is a form of advanced radiotherapy providing superior distributions of a low LET radiation dose relative to that of photon therapy for the treatment of cancer. Even though this clinical treatment has been developing for several decades, the proton radiobiology critical to the optimization of proton radiotherapy is far from being understood. Proteomic changes were analyzed in human melanoma cells treated with a sublethal dose (3 Gy) of proton beam irradiation. The results were compared with untreated cells. Two-dimensional electrophoresis was performed with mass spectrometry to identify the proteins. At the dose of 3 Gy a minimal slowdown in proliferation rate was seen, as well as some DNA damage. After allowing time for damage repair, the proteomic analysis was performed. In total 17 protein levels were found to significantly (more than 1.5 times) change: 4 downregulated and 13 upregulated. Functionally, they represent four categories: (i) DNA repair and RNA regulation (VCP, MVP, STRAP, FAB-2, Lamine A/C, GAPDH), (ii) cell survival and stress response (STRAP, MCM7, Annexin 7, MVP, Caprin-1, PDCD6, VCP, HSP70), (iii) cell metabolism (TIM, GAPDH, VCP), and (iv) cytoskeleton and motility (Moesin, Actinin 4, FAB-2, Vimentin, Annexin 7, Lamine A/C, Lamine B). A substantial decrease (2.3 x) was seen in the level of vimentin, a marker of epithelial to mesenchymal transition and the metastatic properties of melanoma.

Indexed as

ProteomeProteomicsProtonsCell Line, TumorCell ProliferationCell SurvivalDNA DamageHumansMelanomaStress, PhysiologicalProteomeProtons

Identifiers

PMID24392146
PMCPMC3879347

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.