Evidence map›Paper›PMID 24391881›Full record

ArticlePloS one2013

Localization of a bacterial group II intron-encoded protein in eukaryotic nuclear splicing-related cell compartments.

Rafael Nisa-Martínez, Philippe Laporte, José Ignacio Jiménez-Zurdo, Florian Frugier, Martin Crespi, Nicolás Toro

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Contribution of Mobile Group II Introns toFrontiers in microbiology · 2018
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Rafael Nisa-MartínezConsejo Superior de Investigaciones Científicas, Estación Experimental del Zaidín Grupo de Ecología Genética, Granada, Spain.
Philippe LaporteCentre National de la Recherche Scientifique, Institut des Sciences du Végétal, Gif-sur-Yvette, France.
José Ignacio Jiménez-ZurdoConsejo Superior de Investigaciones Científicas, Estación Experimental del Zaidín Grupo de Ecología Genética, Granada, Spain.
Florian FrugierCentre National de la Recherche Scientifique, Institut des Sciences du Végétal, Gif-sur-Yvette, France.
Martin CrespiCentre National de la Recherche Scientifique, Institut des Sciences du Végétal, Gif-sur-Yvette, France.
Nicolás ToroCentre National de la Recherche Scientifique, Institut des Sciences du Végétal, Gif-sur-Yvette, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Some bacterial group II introns are widely used for genetic engineering in bacteria, because they can be reprogrammed to insert into the desired DNA target sites. There is considerable interest in developing this group II intron gene targeting technology for use in eukaryotes, but nuclear genomes present several obstacles to the use of this approach. The nuclear genomes of eukaryotes do not contain group II introns, but these introns are thought to have been the progenitors of nuclear spliceosomal introns. We investigated the expression and subcellular localization of the bacterial RmInt1 group II intron-encoded protein (IEP) in Arabidopsis thaliana protoplasts. Following the expression of translational fusions of the wild-type protein and several mutant variants with EGFP, the full-length IEP was found exclusively in the nucleolus, whereas the maturase domain alone targeted EGFP to nuclear speckles. The distribution of the bacterial RmInt1 IEP in plant cell protoplasts suggests that the compartmentalization of eukaryotic cells into nucleus and cytoplasm does not prevent group II introns from invading the host genome. Furthermore, the trafficking of the IEP between the nucleolus and the speckles upon maturase inactivation is consistent with the hypothesis that the spliceosomal machinery evolved from group II introns.

Indexed as

Gene Expression Regulation, BacterialArabidopsisBacterial ProteinsCell NucleusGreen Fluorescent ProteinsIntronsMutationProtoplastsReal-Time Polymerase Chain ReactionRecombinant Fusion ProteinsReverse Transcriptase Polymerase Chain ReactionRNA, BacterialRNA, MessengerRNA SplicingSinorhizobium melilotiSpliceosomesBacterial ProteinsDegS protein, Bacteriaenhanced green fluorescent proteinGreen Fluorescent ProteinsRecombinant Fusion ProteinsRNA, BacterialRNA, Messenger

Identifiers

PMID24391881
PMCPMC3877140

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.