Evidence map›Paper›PMID 24387668›Full record

ArticleThe Plant journal : for cell and molecular biology2014

Darkness and gulliver2/phyB mutation decrease the abundance of phosphorylated BZR1 to activate brassinosteroid signaling in Arabidopsis.

Bokyung Kim, Yu Jeong Jeong, Claudia Corvalán, Shozo Fujioka, Seoae Cho, Taesung Park, Sunghwa Choe

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Article in The Plant journal : for cell and molecular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Review
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  5. Article
  6. Article
  7. Article
  8. Review
  9. Regulation of chloroplast biogenesis, development, and signaling by endogenous and exogenous cues.Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Review
  10. Article
  11. Article
  12. Review
  13. International journal of molecular sciences · 2023
    Article
  14. HY5 functions as a systemic signal by integrating BRC1-dependent hormone signaling in tomato bud outgrowth.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Article
  16. Reduced Expression ofPlants (Basel, Switzerland) · 2022
    Article
  17. Article
  18. Article
  19. The Role of E3 Ubiquitin Ligases in Chloroplast Function.International journal of molecular sciences · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Bokyung KimSchool of Biological Sciences, College of Natural Sciences, Seoul National University, Seoul, 151-747, Korea.
Yu Jeong Jeong
Claudia Corvalán
Shozo Fujioka
Seoae Cho
Taesung Park
Sunghwa Choe

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Light is essential for plant survival; as such, plants flexibly adjust their growth and development to best harvest light energy. Brassinosteroids (BRs), plant growth-promoting steroid hormones, are essential for this plasticity of development. However, the precise mechanisms underlying BR-mediated growth under different light conditions remain largely unknown. Here, we show that darkness increases the activity of the BR-specific transcription factor, BZR1, by decreasing the phosphorylated (inactive) form of BZR1 in a proteasome-dependent manner. We observed that COP1, a dark-activated ubiquitin ligase, captures and degrades the inactive form of BZR1. In support of this, BZR1 is abundant in the cop1-4 mutant. The removal of phosphorylated BZR1 in darkness increases the ratio of dephosphorylated to phosphorylated forms of BZR1, thus increasing the chance of active homodimers forming between dephosphorylated BZR1 proteins. Furthermore, a transcriptome analysis revealed the identity of genes that are likely to contribute to the differential growth of hypocotyls in light conditions. Transgenic misexpression of three genes under the 35S promoter in light conditions resulted in elongated petioles and hypocotyls. Our results suggest that light conditions directly control BR signaling by modulating BZR1 stability, and consequently by establishing light-dependent patterns of hypocotyl growth in Arabidopsis.

Indexed as

DarknessGene Expression Regulation, PlantPlant DevelopmentArabidopsisArabidopsis ProteinsBrassinosteroidsDimerizationDNA-Binding ProteinsMutationNuclear ProteinsPhosphorylationPhytochrome BSignal TransductionUbiquitin-Protein LigasesArabidopsis ProteinsAT2G32950 protein, ArabidopsisBrassinosteroidsBZR1 protein, ArabidopsisDNA-Binding ProteinsNuclear ProteinsPHYB protein, ArabidopsisPhytochrome BUbiquitin-Protein LigasesArabidopsis thalianabrassinazolebrassinosteroidshypocotyl elongationphotomorphogenesisproteasome

Identifiers

PMID24387668
PMCPMC4282538

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.