Evidence map›Paper›PMID 24386548›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2013

Integration of XNAT/PACS, DICOM, and Research Software for Automated Multi-modal Image Analysis.

Yurui Gao, Scott S Burns, Carolyn B Lauzon, Andrew E Fong, Terry A James, Joel F Lubar, Robert W Thatcher, David A Twillie, Michael D Wirt, Marc A Zola and 3 more

Abstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Article
  3. Improved Automatic Optic Nerve Radius Estimation from High Resolution MRI.Proceedings of SPIE--the International Society for Optical Engineering · 2017
    Article
  4. Article
  5. Article
  6. A 3D high resolutionProceedings of SPIE--the International Society for Optical Engineering · 2016
    Article
  7. Short Term Reproducibility of a High Contrast 3-D Isotropic Optic Nerve Imaging Sequence in Healthy Controls.Proceedings of SPIE--the International Society for Optical Engineering · 2016
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Integrating histology and MRI in the first digital brain of common squirrel monkey,Proceedings of SPIE--the International Society for Optical Engineering · 2015
    Article
  13. Quantitative characterization of optic nerve atrophy in patients with multiple sclerosis.Multiple sclerosis journal - experimental, translational and clinical
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yurui GaoBiomedical Engineering, Vanderbilt University, Nashville, TN, USA 37235 ; Institute of Imaging Science, Vanderbilt University, Nashville, TN, USA 37235.
Scott S BurnsVanderbilt Kennedy Center, Vanderbilt University, Nashville, TN, USA 37235.
Carolyn B LauzonInstitute of Imaging Science, Vanderbilt University, Nashville, TN, USA 37235 ; Electrical Engineering and Computer Science, Vanderbilt University, Nashville, TN, USA 37235.
Andrew E FongBlanchfield Army Community Hospital, Fort Campbell, KY, USA 42223.
Terry A JamesBlanchfield Army Community Hospital, Fort Campbell, KY, USA 42223.
Joel F LubarSoutheastern Biofeedback Institute, Inc., Knoxville, TN, USA 37996.
Robert W ThatcherApplied Neuroscience, Inc., St. Petersburg, FL, USA 33708.
David A TwillieBlanchfield Army Community Hospital, Fort Campbell, KY, USA 42223.
Michael D WirtBlanchfield Army Community Hospital, Fort Campbell, KY, USA 42223.
Marc A ZolaBlanchfield Army Community Hospital, Fort Campbell, KY, USA 42223.
Bret W LoganBlanchfield Army Community Hospital, Fort Campbell, KY, USA 42223.
Adam W AndersonBiomedical Engineering, Vanderbilt University, Nashville, TN, USA 37235 ; Institute of Imaging Science, Vanderbilt University, Nashville, TN, USA 37235 ; Radiology and Radiological Sciences, Vanderbilt University, Nashville, TN, USA 37235.
Bennett A LandmanBiomedical Engineering, Vanderbilt University, Nashville, TN, USA 37235 ; Institute of Imaging Science, Vanderbilt University, Nashville, TN, USA 37235 ; Electrical Engineering and Computer Science, Vanderbilt University, Nashville, TN, USA 37235 ; Radiology and Radiological Sciences, Vanderbilt University, Nashville, TN, USA 37235.

Funding

Postdoctoral Training in Biomedical MRI and MRST32EB001628 · NIBIB · VANDERBILT UNIVERSITY MEDICAL CENTER · PI John C Gore · 2003 to 2026
$7.0M
Resource Development for the Java Image Science ToolkitR03EB012461 · NIBIB · VANDERBILT UNIVERSITY · PI LANDMAN, BENNETT A. · 2010 to 2010
$147k
NIBIB NIH HHS R03 EB012461NIBIB NIH HHS T32 EB001628
6 · The paper itself

Abstract

Traumatic brain injury (TBI) is an increasingly important public health concern. While there are several promising avenues of intervention, clinical assessments are relatively coarse and comparative quantitative analysis is an emerging field. Imaging data provide potentially useful information for evaluating TBI across functional, structural, and microstructural phenotypes. Integration and management of disparate data types are major obstacles. In a multi-institution collaboration, we are collecting electroencephalogy (EEG), structural MRI, diffusion tensor MRI (DTI), and single photon emission computed tomography (SPECT) from a large cohort of US Army service members exposed to mild or moderate TBI who are undergoing experimental treatment. We have constructed a robust informatics backbone for this project centered on the DICOM standard and eXtensible Neuroimaging Archive Toolkit (XNAT) server. Herein, we discuss (1) optimization of data transmission, validation and storage, (2) quality assurance and workflow management, and (3) integration of high performance computing with research software.

Indexed as

automatic multi-modal image analysistraumatic brain injuryXNAT

Identifiers

PMID24386548
PMCPMC3877247

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.