Evidence map›Paper›PMID 24386391›Full record

ArticlePloS one2013

Tyrosine phosphorylation allows integration of multiple signaling inputs by IKKβ.

April N Meyer, Kristine A Drafahl, Christopher W McAndrew, Jennifer E Gilda, Leandro H Gallo, Martin Haas, Laurence M Brill, Daniel J Donoghue

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

April N MeyerDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, California, United States of America.
Kristine A DrafahlDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, California, United States of America.
Christopher W McAndrewDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, California, United States of America.
Jennifer E GildaDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, California, United States of America.
Leandro H GalloDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, California, United States of America.
Martin HaasMoores UCSD Cancer Center, University of California San Diego, La Jolla, California, United States of America.
Laurence M BrillSanford-Burnham Medical Research Institute, La Jolla, California, United States of America.
Daniel J DonoghueDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, California, United States of America ; Moores UCSD Cancer Center, University of California San Diego, La Jolla, California, United States of America.
University of California, San Diego · USSanford Burnham Prebys Medical Discovery Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Signaling regulated by NFκB and related transcription factors is centrally important to many inflammatory and autoimmune diseases, cancer, and stress responses. The kinase that directly regulates the canonical NFκB transcriptional pathway, Inhibitor of κB kinase β (IKKβ), undergoes activation by Ser phosphorylation mediated by NIK or TAK1 in response to inflammatory signals. Using titanium dioxide-based phosphopeptide enrichment (TiO2)-liquid chromatography (LC)-high mass accuracy tandem mass spectrometry (MS/MS), we analyzed IKKβ phosphorylation in human HEK293 cells expressing IKKβ and FGFR2, a Receptor tyrosine kinase (RTK) essential for embryonic differentiation and dysregulated in several cancers. We attained unusually high coverage of IKKβ, identifying an abundant site of Tyr phosphorylation at Tyr169 within the Activation Loop. The phosphomimic at this site confers a level of kinase activation and NFκB nuclear localization exceeding the iconic mutant S177E/S181E, demonstrating that RTK-mediated Tyr phosphorylation of IKKβ has the potential to directly regulate NFκB transcriptional activation.

Indexed as

Amino Acid SubstitutionEnzyme ActivationHEK293 CellsHumansI-kappa B KinaseMutation, MissenseNF-kappa BPhosphorylationProtein Structure, SecondaryReceptor, Fibroblast Growth Factor, Type 2Signal TransductionTranscriptional ActivationTyrosineFGFR2 protein, humanI-kappa B KinaseIKBKB protein, humanNF-kappa BReceptor, Fibroblast Growth Factor, Type 2Tyrosine

Identifiers

PMID24386391
PMCPMC3873999
OpenAlexW2096153562

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.