Evidence map›Paper›PMID 24386290›Full record

ArticlePloS one2013

Proteomic characterization of murid herpesvirus 4 extracellular virions.

Sarah Vidick, Baptiste Leroy, Leonor Palmeira, Bénédicte Machiels, Jan Mast, Sylvie François, Ruddy Wattiez, Alain Vanderplasschen, Laurent Gillet

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
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  8. Article
  9. Annexins in Translational Research: Hidden Treasures to Be Found.International journal of molecular sciences · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Sarah VidickDepartment of Infectious Diseases, Faculty of Veterinary Medicine, University of Liège, Liège, Belgium.
Baptiste LeroyDepartment of Proteomics and Microbiology, Research Institute for Biosciences Interdisciplinary Mass Spectrometry Center (CISMa), University of Mons, Mons, Belgium.
Leonor PalmeiraDepartment of Infectious Diseases, Faculty of Veterinary Medicine, University of Liège, Liège, Belgium.
Bénédicte MachielsDepartment of Infectious Diseases, Faculty of Veterinary Medicine, University of Liège, Liège, Belgium.
Jan MastElectron Microscopy Unit, Veterinary and Agrochemical Research Centre, Brussels, Belgium.
Sylvie FrançoisDepartment of Infectious Diseases, Faculty of Veterinary Medicine, University of Liège, Liège, Belgium.
Ruddy WattiezDepartment of Proteomics and Microbiology, Research Institute for Biosciences Interdisciplinary Mass Spectrometry Center (CISMa), University of Mons, Mons, Belgium.
Alain VanderplasschenDepartment of Infectious Diseases, Faculty of Veterinary Medicine, University of Liège, Liège, Belgium.
Laurent GilletDepartment of Infectious Diseases, Faculty of Veterinary Medicine, University of Liège, Liège, Belgium.
University of Liège · BEUniversity of Mons · BEVeterinary and Agrochemical Research Centre · BE

Funding

Wellcome TrustWellcome Trust GR076956MA
6 · The paper itself

Abstract

Gammaherpesvirinae, such as the human Epstein-Barr virus (EBV) and the Kaposi's sarcoma associated herpesvirus (KSHV) are highly prevalent pathogens that have been associated with several neoplastic diseases. As EBV and KSHV are host-range specific and replicate poorly in vitro, animal counterparts such as Murid herpesvirus-4 (MuHV-4) have been widely used as models. In this study, we used MuHV-4 in order to improve the knowledge about proteins that compose gammaherpesviruses virions. To this end, MuHV-4 extracellular virions were isolated and structural proteins were identified using liquid chromatography tandem mass spectrometry-based proteomic approaches. These analyses allowed the identification of 31 structural proteins encoded by the MuHV-4 genome which were classified as capsid (8), envelope (9), tegument (13) and unclassified (1) structural proteins. In addition, we estimated the relative abundance of the identified proteins in MuHV-4 virions by using exponentially modified protein abundance index analyses. In parallel, several host proteins were found in purified MuHV-4 virions including Annexin A2. Although Annexin A2 has previously been detected in different virions from various families, its role in the virion remains controversial. Interestingly, despite its relatively high abundance in virions, Annexin A2 was not essential for the growth of MuHV-4 in vitro. Altogether, these results extend previous work aimed at determining the composition of gammaherpesvirus virions and provide novel insights for understanding MuHV-4 biology.

Indexed as

ProteomicsAnimalsCapsidCell LineCricetinaeExtracellular SpaceGlycosylationMass SpectrometryRhadinovirusViral ProteinsVirionViral Proteins

Identifiers

PMID24386290
PMCPMC3875534
OpenAlexW2119053006

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.