Evidence map›Paper›PMID 24386269›Full record

ArticlePloS one2013

Exposure to cobalt causes transcriptomic and proteomic changes in two rat liver derived cell lines.

Matthew G Permenter, William E Dennis, Thomas E Sutto, David A Jackson, John A Lewis, Jonathan D Stallings

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 52 citations in OpenAlex.

  1. Interplay Between Vitamin D Levels and Heavy Metals Exposure in Pregnancy and Childbirth: A Systematic Review.Pathophysiology : the official journal of the International Society for Pathophysiology · 2024
    Review
  2. Article
  3. Article
  4. Article
  5. Observational
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  7. Drp-1-Dependent Mitochondrial Fragmentation Contributes to Cobalt Chloride-Induced Toxicity in Caenorhabditis elegans.Toxicological sciences : an official journal of the Society of Toxicology · 2020
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Ototoxicity of Divalent Metals.Neurotoxicity research · 2016
    Review
  15. The epigenetic regulation of HIF-1α by SIRT1 in MPP(+) treated SH-SY5Y cells.Biochemical and biophysical research communications · 2016
    Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Matthew G PermenterExcet, Inc., Fort Detrick, Maryland, United States of America.
William E DennisUS Army Center for Environmental Health Research, Fort Detrick, Maryland, United States of America.
Thomas E SuttoNaval Research Laboratory, Washington, District of Columbia, United States of America.
David A JacksonUS Army Center for Environmental Health Research, Fort Detrick, Maryland, United States of America.
John A LewisUS Army Center for Environmental Health Research, Fort Detrick, Maryland, United States of America.
Jonathan D StallingsUS Army Center for Environmental Health Research, Fort Detrick, Maryland, United States of America.
Center for Environmental Health · USExcet (United States) · USUnited States Naval Research Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cobalt is a transition group metal present in trace amounts in the human diet, but in larger doses it can be acutely toxic or cause adverse health effects in chronic exposures. Its use in many industrial processes and alloys worldwide presents opportunities for occupational exposures, including military personnel. While the toxic effects of cobalt have been widely studied, the exact mechanisms of toxicity remain unclear. In order to further elucidate these mechanisms and identify potential biomarkers of exposure or effect, we exposed two rat liver-derived cell lines, H4-II-E-C3 and MH1C1, to two concentrations of cobalt chloride. We examined changes in gene expression using DNA microarrays in both cell lines and examined changes in cytoplasmic protein abundance in MH1C1 cells using mass spectrometry. We chose to closely examine differentially expressed genes and proteins changing in abundance in both cell lines in order to remove cell line specific effects. We identified enriched pathways, networks, and biological functions using commercial bioinformatic tools and manual annotation. Many of the genes, proteins, and pathways modulated by exposure to cobalt appear to be due to an induction of a hypoxic-like response and oxidative stress. Genes that may be differentially expressed due to a hypoxic-like response are involved in Hif-1α signaling, glycolysis, gluconeogenesis, and other energy metabolism related processes. Gene expression changes linked to oxidative stress are also known to be involved in the NRF2-mediated response, protein degradation, and glutathione production. Using microarray and mass spectrometry analysis, we were able to identify modulated genes and proteins, further elucidate the mechanisms of toxicity of cobalt, and identify biomarkers of exposure and effect in vitro, thus providing targets for focused in vivo studies.

Indexed as

ProteomeTranscriptomeAnimalsBiomarkersCell LineCluster AnalysisCobaltComputational BiologyEnergy MetabolismGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHypoxia-Inducible Factor 1, alpha SubunitLiverMass SpectrometryMetabolic Networks and PathwaysBiomarkersCobaltcobaltous chlorideHypoxia-Inducible Factor 1, alpha SubunitProteome

Identifiers

PMID24386269
PMCPMC3875483
OpenAlexW1973127599

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.