Evidence map›Paper›PMID 24386187›Full record

ArticlePloS one2013

Molecular typing of environmental and clinical strains of Vibrio vulnificus isolated in the northeastern USA.

Yann Reynaud, Steven Pitchford, Sophie De Decker, Gary H Wikfors, Christopher L Brown

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Collection and curation of prokaryotic genome assemblies from type strains at NCBI.International journal of systematic and evolutionary microbiology · 2023
    Article
  5. Article
  6. The Impact of Water Intrusion on PathogenicInternational journal of environmental research and public health · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Occurrence of clinical genotypeJournal of food science and technology · 2017
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yann ReynaudNOAA (National Oceanic and Atmospheric Administration), NEFSC (Northeast Fisheries Science Center), Milford Laboratory, Milford, Connecticut, United States of America.
Steven PitchfordNOAA (National Oceanic and Atmospheric Administration), NEFSC (Northeast Fisheries Science Center), Milford Laboratory, Milford, Connecticut, United States of America.
Sophie De DeckerNOAA (National Oceanic and Atmospheric Administration), NEFSC (Northeast Fisheries Science Center), Milford Laboratory, Milford, Connecticut, United States of America.
Gary H WikforsNOAA (National Oceanic and Atmospheric Administration), NEFSC (Northeast Fisheries Science Center), Milford Laboratory, Milford, Connecticut, United States of America.
Christopher L BrownNOAA (National Oceanic and Atmospheric Administration), NEFSC (Northeast Fisheries Science Center), Milford Laboratory, Milford, Connecticut, United States of America.
NOAA National Marine Fisheries Service Northeast Fisheries Science Center · USNational Oceanic and Atmospheric Administration · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vibrio vulnificus is a ubiquitous marine bacterium that is responsible for infections and some seafood-related illnesses and deaths in the United States, mainly in individuals with compromised health status in the Gulf of Mexico region. Most phylogenetic studies focus on V. vulnificus strains isolated in the southern United States, but almost no genetic data are available on northeastern bacterial isolates of clinical or environmental origin. Our goal in this study was to examine the genetic diversity of environmental strains isolated from commercially-produced oysters and in clinical strains of known pathogenicity in northeastern United States. We conducted analyses of a total of eighty-three strains of V. vulnificus, including 18 clinical strains known to be pathogenic. A polyphasic, molecular-typing approach was carried out, based upon established biotypes, vcg, CPS, 16S rRNA types and three other genes possibly associated with virulence (arylsulfatase A, mtlABC, and nanA). An established Multi Locus Sequence Typing (MLST) method was also performed. Phylogenetic analyses of these markers and MLST results produced similar patterns of clustering of strains into two main lineages (we categorized as 'LI' and 'LII'), with clinical and environmental strains clustering together in both lineages. Lineage LII was comprised primarily but not entirely of clinical bacterial isolates. Putative virulence markers were present in both clinical and environmental strains. These results suggest that some northeastern environmental strains of V. vulnificus are phylogenetically close to clinical strains and probably are capable of virulence. Further studies are necessary to assess the risk of human illness from consuming raw oysters harvested in the northeastern US.

Indexed as

Environmental MicrobiologyMolecular TypingFood MicrobiologyGenetic VariationHumansMolecular Sequence DataMultilocus Sequence TypingPhylogenyPolymorphism, GeneticSeafoodVibrio InfectionsVibrio vulnificus

Identifiers

PMID24386187
PMCPMC3875459
OpenAlexW2034579411

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.