ArticlePloS one2013
A high-density SNP map for accurate mapping of seed fibre QTL in Brassica napus L.
Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers, 1 of them a synthesis that pooled it.
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Who cites it
62 citing papers in PubMed, 1 synthesis or guideline pooled it, 123 citations in OpenAlex.
- QTL meta-analysis of root traits in Brassica napus under contrasting phosphorus supply in two growth systems.Scientific reports · 2016Pooled it
- Integrative QTL mapping and transcriptomic profiling uncover molecular mechanisms underlying lodging resistance inHorticulture research · 2026Review
- Identification of the Cinnamyl Alcohol Dehydrogenase Gene Family inPlants (Basel, Switzerland) · 2025Article
- Breeding and biotechnology approaches to enhance the nutritional quality of rapeseed byproducts for sustainable alternative protein sources- a critical review.Frontiers in plant science · 2024Review
- A systems genomics and genetics approach to identify the genetic regulatory network for lignin content inFrontiers in plant science · 2024Article
- Comparative genomic analyses reveal the genetic basis of the yellow-seed trait in Brassica napus.Nature communications · 2023Article
- Homoeologous non-reciprocal translocation explains a major QTL for seed lignin content in oilseed rape (Brassica napus L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- Genetic Dissection and Germplasm Selection of the Low Crude Fiber Component inFoods (Basel, Switzerland) · 2023Article
- The Flavonoid Biosynthesis and Regulation inInternational journal of molecular sciences · 2022Review
- Further insight into decreases in seed glucosinolate content based on QTL mapping and RNA-seq in Brassica napus L.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- A major yellow-seed QTL on chromosome A09 significantly increases the oil content and reduces the fiber content of seed in Brassica napus.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- QTL Identification for Stem Fiber, Strength and Rot Resistance in a DH Population from an Alien Introgression ofPlants (Basel, Switzerland) · 2022Article
- Genome-wide association study and transcriptome analysis dissect the genetic control of silique length in Brassica napus L.Biotechnology for biofuels · 2021Article
- Article
- Comparative transcriptomic analysis of seed coats with high and low lignin contents reveals lignin and flavonoid biosynthesis in Brassica napus.BMC plant biology · 2021Article
- A high-quality Brassica napus genome reveals expansion of transposable elements, subgenome evolution and disease resistance.Plant biotechnology journal · 2021Article
- Identification of SNPs and InDels associated with berry size in table grapes integrating genetic and transcriptomic approaches.BMC plant biology · 2020Article
- Quantitative Trait Locus Mapping and Identification of Candidate Genes Controlling Flowering Time inFrontiers in plant science · 2020Article
- Integrating GWAS, linkage mapping and gene expression analyses reveals the genetic control of growth period traits in rapeseed (Biotechnology for biofuels · 2020Article
- Deciphering the transcriptional regulatory networks that control size, color, and oil content inBiotechnology for biofuels · 2020Article
2 more citing papers are in PubMed but not listed here.
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Authors and funding
8 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A high density genetic linkage map for the complex allotetraploid crop species Brassica napus (oilseed rape) was constructed in a late-generation recombinant inbred line (RIL) population, using genome-wide single nucleotide polymorphism (SNP) markers assayed by the Brassica 60 K Infinium BeadChip Array. The linkage map contains 9164 SNP markers covering 1832.9 cM. 1232 bins account for 7648 of the markers. A subset of 2795 SNP markers, with an average distance of 0.66 cM between adjacent markers, was applied for QTL mapping of seed colour and the cell wall fiber components acid detergent lignin (ADL), cellulose and hemicellulose. After phenotypic analyses across four different environments a total of 11 QTL were detected for seed colour and fiber traits. The high-density map considerably improved QTL resolution compared to the previous low-density maps. A previously identified major QTL with very high effects on seed colour and ADL was pinpointed to a narrow genome interval on chromosome A09, while a minor QTL explaining 8.1% to 14.1% of variation for ADL was detected on chromosome C05. Five and three QTL accounting for 4.7% to 21.9% and 7.3% to 16.9% of the phenotypic variation for cellulose and hemicellulose, respectively, were also detected. To our knowledge this is the first description of QTL for seed cellulose and hemicellulose in B. napus, representing interesting new targets for improving oil content. The high density SNP genetic map enables navigation from interesting B. napus QTL to Brassica genome sequences, giving useful new information for understanding the genetics of key seed quality traits in rapeseed.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.