Evidence map›Paper›PMID 24385720›Full record

ArticleTurkish journal of haematology : official journal of Turkish Society of Haematology2012

Upregulation of T-Cell-Specific Transcription Factor Expression in Pediatric T-Cell Acute Lymphoblastic Leukemia (T-ALL).

Müge Sayitoğlu, Yücel Erbilgin, Ozden Hatırnaz Ng, Inci Yıldız, Tiraje Celkan, Sema Anak, Omer Devecioğlu, Gönül Aydoğan, Serap Karaman, Nazan Sarper and 3 more

Open access · diamondAbstract read
In one paragraph

Article in Turkish journal of haematology : official journal of Turkish Society of Haematology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Müge Sayitoğluİstanbul University, Department of Genetics, Institute of Experimental Medicine, İstanbul, Turkey.
Yücel Erbilginİstanbul University, Department of Genetics, Institute of Experimental Medicine, İstanbul, Turkey.
Ozden Hatırnaz Ngİstanbul University, Department of Genetics, Institute of Experimental Medicine, İstanbul, Turkey.
Inci Yıldızİstanbul University, Cerrahpaşa School of Medicine, Department of Pediatric Hematology, İstanbul, Turkey.
Tiraje Celkanİstanbul University, Cerrahpaşa School of Medicine, Department of Pediatric Hematology, İstanbul, Turkey.
Sema Anakİstanbul University, İstanbul School of Medicine, Department of Pediatric Hematology, İstanbul, Turkey.
Omer Devecioğluİstanbul University, İstanbul School of Medicine, Department of Pediatric Hematology, İstanbul, Turkey.
Gönül AydoğanBakırköy Maternity and Children's Hospital, Department of Pediatrics, İstanbul, Turkey.
Serap KaramanMinistry of Health Şişli Etfal Teaching Hospital, Department of Pediatric Hematology, İstanbul, Turkey.
Nazan SarperKocaeli School of Medicine, Department of Pediatric Hematology, Kocaeli, Turkey.
Cetin TimurMinistry of Health Göztepe Teaching Hospital, Department of Pediatric Hematology, İstanbul, Turkey.
Umit UreMinistry of Health Bakırköy Sadi Konuk Teaching Hospital, Department of Hematology, İstanbul, Turkey.
Uğur Ozbekİstanbul University, Department of Genetics, Institute of Experimental Medicine, İstanbul, Turkey.
Istanbul University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveT-cell acute lymphoblastic leukemia (T-ALL) is associated with recurrent chromosomal aberrations andabnormal ectopic gene expression during T-cell development. In order to gain insight into the pathogenesis of T-ALLthis study aimed to measure the level of expression of 7 T-cell oncogenes (LMO2, LYL1, TAL1, TLX1, TLX3, BMI1, andCALM-AF10) in pediatric T-ALL patients Material and Methods: LMO2, LYL1, TLX1, TLX3, BMI1, TAL1, and CALM-AF10 expression was measured usingquantitative real-time PCR in 43 pediatric T-ALL patients.

resultsA high level of expression of LMO2, LYL1, TAL1, and BMI1 genes was observed in a large group of T-ALL.Several gene expression signatures indicative of leukemic arrest at specific stages of normal thymocyte development(LYL1 and LMO2) were highly expressed during the cortical and mature stages of T-cell development. Furthermore,upregulated TAL1 and BMI1 expression was observed in all phenotypic subgroups. In all, 6 of the patients had TLX1and TLX3 proto-oncogene expression, which does not occur in normal cells, and none of the patients had CALM-AF10fusion gene transcription. Expression of LYL1 alone and LMO2-LYL1 co-expression were associated with mediastinalinvolvement; however, high-level oncogene expression was not predictive of outcome in the present pediatric T-ALLpatient group, but there was a trend towards a poor prognostic impact of TAL1 and/or LMO2 and/or LYL1 protooncogeneexpression.

conclusionPoor prognostic impact of TAL1 and/or LMO2 and/or LYL1 proto-oncogene expression indicate the needfor extensive study on oncogenic rearrangement and immunophenotypic markers in T-ALL, and their relationship totreatment outcome. CONFLICT OF INTEREST: None declared.

Indexed as

ExpressionPediatricprognosisT-ALLTranscription factor

Identifiers

PMID24385720
PMCPMC3781625
OpenAlexW1974039934

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.