Evidence map›Paper›PMID 24385435›Full record

ArticleThe Journal of biological chemistry2014

Transcriptional regulation of IFN-λ genes in hepatitis C virus-infected hepatocytes via IRF-3·IRF-7·NF-κB complex.

Hai-Chon Lee, Sowmya Narayanan, Sung-Jae Park, Seung-Yong Seong, Young S Hahn

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 41 citations in OpenAlex.

  1. Review
  2. Article
  3. IntrahepaticViruses · 2021
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Host immune response in chronic hepatitis C infection: involvement of cytokines and inflammasomes.Romanian journal of morphology and embryology = Revue roumaine de morphologie et embryologie · 2020
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. The role of IL-29 in immunity and cancer.Critical reviews in oncology/hematology · 2016
    Review
  17. Article
  18. Immune Activation in the Liver by Nucleic Acids.Journal of clinical and translational hepatology · 2016
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Hai-Chon LeeFrom the Department of Microbiology, Beirne B. Carter Center for Immunology Research, University of Virginia, Charlottesville, Virginia 22908.
Sowmya Narayanan
Sung-Jae Park
Seung-Yong Seong
Young S Hahn
University of Virginia · USCarter Center · USInje University · KRSeoul National University · KR

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007267 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI GARCIA-BLANCO, MARIANO A. · 1985 to 2024
$13.4M
Suppression of HCV-specific CD4+ T Cells by Core ProteinU19AI066328 · NIAID · UNIVERSITY OF COLORADO DENVER · PI ROSEN, HUGO RAMON · 2005 to 2014
$6.8M
Role of HCV in aberrant APC activation/functionR01AI098126 · NIAID · UNIVERSITY OF VIRGINIA · PI HAHN, YOUNG S. · 2012 to 2016
$1.9M
NIAID NIH HHS AI066328NIAID NIH HHS AI098126NIAID NIH HHS R01 AI098126NIAID NIH HHS U19 AI066328
6 · The paper itself

Abstract

Hepatitis C virus (HCV) infection in hepatocytes stimulates innate antiviral responses including the production of type III interferons (IFN-λ), including IL-28A, IL-28B, and IL-29. However, the molecular mechanism(s) regulating the expression of IFN-λ genes in HCV-infected hepatocytes remains undefined. In this study, we examined regulatory elements involved in the induction of IFN-λ genes following HCV infection in hepatocytes and further determined the binding of specific transcription factor(s) to promoter regions of IFN-λ genes. Our studies reveal that the regulatory portion for IL-28A, IL-28B, and IL-29 genes is localized to a 1-kb region in their respective promoters. Notably, interferon regulatory factor (IRF)-3 and -7 are the key transcriptional factors for the induction of IL-28A and IL-28B genes, whereas NF-κB is an additional requirement for the induction of the IL-29 gene. Ligation of Toll-like receptors (TLR) 3, 7, 8, and 9, which also activate IRFs and NF-κB, resulted in more robust production of IFN-λ than that observed with HCV infection, verifying the importance of TLR pathways in IFN-λ production. Furthermore, the addition of IFN-λ to HCV-infected hepatocytes decreased viral replication and produced a concurrent reduction in microRNA-122 (miR-122). The decrease in viral replication was enhanced by the co-administration of IFN-λ and miR-122 inhibitor (miRIDIAN), suggesting that such combinatorial therapies may be beneficial for the treatment of chronic HCV infection.

Indexed as

Gene Expression RegulationCells, CulturedHepacivirusHepatitis CHepatocytesHumansInterferon LambdaInterferon Regulatory Factor-3Interferon Regulatory Factor-7InterferonsInterleukinsLigandsLiverMicroRNAsNF-kappa BPromoter Regions, GeneticInterferon Lambdainterferon-lambda, humanInterferon Regulatory Factor-3Interferon Regulatory Factor-7InterferonsInterleukinsIRF3 protein, humanIRF7 protein, humanLigandsMicroRNAsMIRN22 microRNA, humanNF-kappa BCytokines inductionHepatitis c virusInterferonInterferon regulatory factorNF-κBTranscription factorsTranscription promoter

Identifiers

PMID24385435
PMCPMC3931086
OpenAlexW1569725267

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.