ArticleMolecular biology reports2014
Analysis of flooding-responsive proteins localized in the nucleus of soybean root tips.
Article in Molecular biology reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.
What it found
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Who cites it
7 citing papers in PubMed, 30 citations in OpenAlex.
- Recent Advances in Carbon and Nitrogen Metabolism in C3 Plants.International journal of molecular sciences · 2020Review
- Review: Proteomic Techniques for the Development of Flood-Tolerant Soybean.International journal of molecular sciences · 2020Review
- Ocimum metabolomics in response to abiotic stresses: Cold, flood, drought and salinity.PloS one · 2019Article
- Phenotype Prediction and Genome-Wide Association Study Using Deep Convolutional Neural Network of Soybean.Frontiers in genetics · 2019Article
- Subcellular Proteomics: Application to Elucidation of Flooding-Response Mechanisms in Soybean.Proteomes · 2018Review
- Arabidopsis receptor of activated C kinase1 phosphorylation by WITH NO LYSINE8 KINASE.Plant physiology · 2015Article
- Advances in plant proteomics toward improvement of crop productivity and stress resistancex.Frontiers in plant science · 2015Review
Corrections and comments
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Authors and funding
3 authors at 1 institution in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Flooding stress has negative impact on soybean cultivation as it severely impairs plant growth and development. To examine whether nuclear function is affected in soybean under flooding stress, abundance of nuclear proteins and their mRNA expression were analyzed. Two-day-old soybean seedlings were treated with flooding for 2 days, and nuclear proteins were purified from root tips. Gel-free proteomics analysis identified a total of 39 flooding-responsive proteins, of which abundance of 8 and 31 was increased and decreased, respectively, in soybean root tips. Among these differentially regulated proteins, the mRNA expression levels of five nuclear-localized proteins were further analyzed. The mRNA levels of four proteins, which are splicing factor PWI domain-containing protein, epsilon2-COP, beta-catenin, and clathrin heavy chain decreased under flooding stress, were also down-regulated. In addition, mRNA level of a receptor for activated protein kinase C1(RACK1) was down-regulated, though its protein was accumulated in the soybean nucleus in response to flooding stress. These results suggest that several nuclear-related proteins are decreased at both the protein and mRNA level in the root tips of soybean under flooding stress. Furthermore, RACK1 might have an important role with accumulation in the soybean nucleus under flooding-stress conditions.
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