Evidence map›Paper›PMID 24381171›Full record

ArticleThe Journal of biological chemistry2014

Genetic characterization and role in virulence of the ribonucleotide reductases of Streptococcus sanguinis.

DeLacy V Rhodes, Katie E Crump, Olga Makhlynets, Melanie Snyder, Xiuchun Ge, Ping Xu, JoAnne Stubbe, Todd Kitten

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
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  5. Dpr-mediated HJournal of bacteriology · 2024
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  6. An energy coupling factor transporter ofbioRxiv : the preprint server for biology · 2024
    Article
  7. Article
  8. Why is manganese so valuable to bacterial pathogens?Frontiers in cellular and infection microbiology · 2023
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Review
  17. Article
  18. Intracellular Metal Speciation inACS infectious diseases · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

DeLacy V RhodesFrom the Philips Institute for Oral Health Research, Virginia Commonwealth University, Richmond, Virginia 23298 and.
Katie E Crump
Olga Makhlynets
Melanie Snyder
Xiuchun Ge
Ping Xu
JoAnne Stubbe
Todd Kitten
Virginia Commonwealth University · USMassachusetts Institute of Technology · US

Funding

Virginia Commonwealth University IRADCAK12GM093857 · NIGMS · VIRGINIA COMMONWEALTH UNIVERSITY · PI DANIEL C BULLARD, John J Ryan · 2010 to 2026
$7.0M
Ribonucleotide Reductase Regulation: Diferric Y* assembly/maintenance and Sml1R01GM081393 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI STUBBE, JOANNE · 2008 to 2016
$3.9M
Interaction of Colonizer and Pathogen In Oral BiofilmR01DE023078 · NIDCR · VIRGINIA COMMONWEALTH UNIVERSITY · PI XU, PING · 2013 to 2017
$1.9M
Endocarditis virulence in Streptococcus sanguinisR56AI085195 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI KITTEN, TODD O. · 2011 to 2011
$371k
NIAID NIH HHS R56 AI085195NIAID NIH HHS R56AI085195NIDCR NIH HHS R01 DE023078NIGMS NIH HHS GM81393NIGMS NIH HHS K12 GM093857NIGMS NIH HHS K12GM093857NIGMS NIH HHS R01 GM081393
6 · The paper itself

Abstract

Streptococcus sanguinis is a cause of infective endocarditis and has been shown to require a manganese transporter called SsaB for virulence and O2 tolerance. Like certain other pathogens, S. sanguinis possesses aerobic class Ib (NrdEF) and anaerobic class III (NrdDG) ribonucleotide reductases (RNRs) that perform the essential function of reducing ribonucleotides to deoxyribonucleotides. The accompanying paper (Makhlynets, O., Boal, A. K., Rhodes, D. V., Kitten, T., Rosenzweig, A. C., and Stubbe, J. (2014) J. Biol. Chem. 289, 6259-6272) indicates that in the presence of O2, the S. sanguinis class Ib RNR self-assembles an essential diferric-tyrosyl radical (Fe(III)2-Y(•)) in vitro, whereas assembly of a dimanganese-tyrosyl radical (Mn(III)2-Y(•)) cofactor requires NrdI, and Mn(III)2-Y(•) is more active than Fe(III)2-Y(•) with the endogenous reducing system of NrdH and thioredoxin reductase (TrxR1). In this study, we have shown that deletion of either nrdHEKF or nrdI completely abolishes virulence in an animal model of endocarditis, whereas nrdD mutation has no effect. The nrdHEKF, nrdI, and trxR1 mutants fail to grow aerobically, whereas anaerobic growth requires nrdD. The nrdJ gene encoding an O2-independent adenosylcobalamin-cofactored RNR was introduced into the nrdHEKF, nrdI, and trxR1 mutants. Growth of the nrdHEKF and nrdI mutants in the presence of O2 was partially restored. The combined results suggest that Mn(III)2-Y(•)-cofactored NrdF is required for growth under aerobic conditions and in animals. This could explain in part why manganese is necessary for virulence and O2 tolerance in many bacterial pathogens possessing a class Ib RNR and suggests NrdF and NrdI may serve as promising new antimicrobial targets.

Indexed as

Bacterial ProteinsEndocarditis, BacterialRibonucleotide ReductasesStreptococcal InfectionsStreptococcusVirulence FactorsAerobiosisAnimalsDisease Models, AnimalGene DeletionHumansOxygenRabbitsBacterial ProteinsNrdF protein, bacteriaOxygenRibonucleotide ReductasesVirulence FactorsBacterial MetabolismBacterial PathogenesisInfective EndocarditisManganeseRibonucleotide ReductaseStreptococcus

Identifiers

PMID24381171
PMCPMC3937693
OpenAlexW2030350346

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.