Evidence map›Paper›PMID 24380675›Full record

ArticleGeneral and comparative endocrinology2014

Molecular cloning and functional characterization of two forms of Pax8 in the rainbow trout, Oncorhynchus mykiss.

Nobuto Katagiri, Youji Uemae, Joe Sakamoto, Yoshie Hidaka, Takao Susa, Yukio Kato, Shioko Kimura, Masakazu Suzuki

Open access · bronzeAbstract read
In one paragraph

Article in General and comparative endocrinology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Nobuto KatagiriDepartment of Biological Science, Graduate School of Science, Shizuoka University, Ohya 836, Shizuoka City, Shizuoka 422-8529, Japan.
Youji UemaeDepartment of Biological Science, Graduate School of Science, Shizuoka University, Ohya 836, Shizuoka City, Shizuoka 422-8529, Japan.
Joe SakamotoDepartment of Biological Science, Graduate School of Science, Shizuoka University, Ohya 836, Shizuoka City, Shizuoka 422-8529, Japan.
Yoshie HidakaDepartment of Biological Science, Graduate School of Science, Shizuoka University, Ohya 836, Shizuoka City, Shizuoka 422-8529, Japan.
Takao SusaDepartment of Life Science, School of Agriculture, Meiji University, 1-1-1 Higashi-mita, Kawasaki, Kanagawa 214-8571, Japan.
Yukio KatoDepartment of Life Science, School of Agriculture, Meiji University, 1-1-1 Higashi-mita, Kawasaki, Kanagawa 214-8571, Japan.
Shioko KimuraLaboratory of Metabolism, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA.
Masakazu SuzukiDepartment of Biological Science, Graduate School of Science, Shizuoka University, Ohya 836, Shizuoka City, Shizuoka 422-8529, Japan. Electronic address: sbmsuzu@ipc.shizuoka.ac.jp.
Shizuoka University · JPMeiji University · JPNational Institutes of Health · US

Funding

Thyroid StemProgenitor CellsZIABC005522 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KIMURA, SHIOKO · 2009 to 2025
$10.5M
Intramural NIH HHS ZIA BC005522
6 · The paper itself

Abstract

We have identified two distinct Pax8 (a and b) mRNAs from the thyroid gland of the rainbow trout (Oncorhynchus mykiss), which seemed to be generated by alternative splicing. Both Pax8a and Pax8b proteins were predicted to possess the paired domain, octapeptide, and partial homeodomain, while Pax8b lacked the carboxy-terminal portion due to an insertion in the coding region of the mRNA. RT-PCR analysis showed each of Pax8a and Pax8b mRNAs to be abundantly expressed in the thyroid and kidney. In situ hybridization histochemistry further detected the expression of Pax8 mRNA in the epithelial cells of the thyroid follicles of the adult trout and in the thyroid primordial cells of the embryo. The functional properties of Pax8a and Pax8b were investigated by dual luciferase assay. The transcriptional regulation by the rat thyroid peroxidase (TPO) promoter was found to be increased by Pax8a, but not by Pax8b. Pax8a further showed synergistic transcriptional activity with rat Nkx2-1 for the human TPO upstream region including the enhancer and promoter. On the other hand, Pax8b decreased the synergistic activity of Pax8a and Nkx2-1. Electrophoretic mobility shift assay additionally indicated that not only Pax8a but also Pax8b can bind to the TPO promoter and enhancer, implying that the inhibitory effect of Pax8b might result from the lack of the functional carboxy-terminal portion. Collectively, the results suggest that for the trout thyroid gland, Pax8a may directly increase TPO gene expression in cooperation with Nkx2-1 while Pax8b may work as a non-activating competitor for the TPO transcription.

Indexed as

Alternative SplicingAmino Acid SequenceAnimalsAutoantigensBase SequenceCloning, MolecularElectrophoretic Mobility Shift AssayFish ProteinsGene Expression RegulationIn Situ HybridizationIodide PeroxidaseIron-Binding ProteinsMembrane ProteinsMolecular Sequence DataNuclear ProteinsOncorhynchus mykissAutoantigensFish ProteinsIodide PeroxidaseIron-Binding ProteinsMembrane ProteinsNKX2-1 protein, humanNkx2-1 protein, ratNuclear ProteinsPaired Box Transcription FactorsProtein IsoformsRNA, MessengerSerinc5 protein, ratThyroid Nuclear Factor 1TPO protein, humanTranscription FactorsNkx2-1Pax8Rainbow troutThyroid glandThyroid transcription factor 1TTF1

Identifiers

PMID24380675
PMCPMC3991817
OpenAlexW2086126151

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.